RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 PPFIA1Q13136 1202 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 PAK1Q13153 545 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 HIC1Q14526 733 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 ZC2HC1CQ53FD0 456 aaPredicted RBP10.7□□□□□ -0.7
RIF1-202ENST00000414861 COBLL1Q53SF7 1204 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 BRDTQ58F21 947 aaPredicted RBP10.7□□□□□ -0.7
RIF1-202ENST00000414861 LHX8Q68G74 356 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 CCSAPQ6IQ19 270 aaPredicted RBP10.7□□□□□ -0.7
RIF1-202ENST00000414861 EPM2AIP1Q7L775 607 aaPredicted RBP10.7□□□□□ -0.7
RIF1-202ENST00000414861 KSR1Q8IVT5 923 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 FAM178BQ8IXR5 827 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 KLHDC9Q8NEP7 349 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 ASAP3Q8TDY4 903 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 LMBR1Q8WVP7 490 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 NELFBQ8WX92 580 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 UNC93B1Q9H1C4 597 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 HSD3B7Q9H2F3 369 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 GRPEL1Q9HAV7 217 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 HMX1Q9NP08 348 aaPredicted RBP10.7□□□□□ -0.7
RIF1-202ENST00000414861 SEL1LQ9UBV2 794 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 DACH1Q9UI36 760 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 ADGRA3Q8IWK6 1321 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 SIP14410 1827 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 GCNT3O95395 438 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 GJB1P08034 283 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 CST5P28325 142 aaPredicted RBP10.69□□□□□ -0.7
RIF1-202ENST00000414861 NPTX2P47972 431 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 CLCN3P51790 818 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 MTFR1Q15390 333 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 GRIK4Q16099 956 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 SLC9C1Q4G0N8 1177 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 ZNF484Q5JVG2 852 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 MARCH8Q5T0T0 291 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 NELFCDQ8IXH7 590 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 MYOCDQ8IZQ8 938 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 GUF1Q8N442 669 aaKnown RBP10.69□□□□□ -0.7
RIF1-202ENST00000414861 KIFAP3Q92845 792 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 IKZF4Q9H2S9 585 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 SEMA6BQ9H3T3 888 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 SUGCTQ9HAC7 445 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 SPC25Q9HBM1 224 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 SETD4Q9NVD3 440 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 LARSQ9P2J5 1176 aaKnown RBP10.69□□□□□ -0.7
RIF1-202ENST00000414861 KIAA0100Q14667 2235 aaKnown RBP10.69□□□□□ -0.7
RIF1-202ENST00000414861 K7ENM7 598 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 SLC16A4O15374 487 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 PPP1R37O75864 691 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 PRPF6O94906 941 aaKnown RBP10.69□□□□□ -0.7
RIF1-202ENST00000414861 GLRA2P23416 452 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 ERCC5P28715 1186 aaPredicted RBP10.69□□□□□ -0.7
RIF1-202ENST00000414861 ARL2P36404 184 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 MYL5Q02045 173 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 KCNA10Q16322 511 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 ZNF720Q7Z2F6 126 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.69□□□□□ -0.7
RIF1-202ENST00000414861 PPME1Q9Y570 386 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 COL1A2P08123 1366 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 ZMYM2Q9UBW7 1377 aa10.69□□□□□ -0.7
RIF1-202ENST00000414861 PSMA7O14818 248 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 ASGR1P07306 291 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 KLRC1P26715 233 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 DMP1Q13316 513 aaPredicted RBP10.68□□□□□ -0.7
RIF1-202ENST00000414861 STIM1Q13586 685 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 L1TD1Q5T7N2 865 aaKnown RBP10.68□□□□□ -0.7
RIF1-202ENST00000414861 TTI2Q6NXR4 508 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 METTL13Q8N6R0 699 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 LINC01465Q8N7H1 131 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 STRA6Q9BX79 667 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 RWDD2AQ9UIY3 292 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 MKI67P46013 3256 aaKnown RBP10.68□□□□□ -0.7
RIF1-202ENST00000414861 CCDC169A6NNP5 214 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 BECN2A8MW95 431 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 NCKAP1LP55160 1127 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 RTP1P59025 263 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 BMT2Q1RMZ1 405 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 HSP90AA4PQ58FG1 418 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 EFCAB12Q6NXP0 572 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 MTHFD1LQ6UB35 978 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 CTU1Q7Z7A3 348 aaKnown RBP10.68□□□□□ -0.7
RIF1-202ENST00000414861 TMEM161BQ8NDZ6 487 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 ENOX1Q8TC92 643 aaKnown RBP10.68□□□□□ -0.7
RIF1-202ENST00000414861 P2RX5Q93086 422 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 EEF2KMTQ96G04 330 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 DHTKD1Q96HY7 919 aaPredicted RBP10.68□□□□□ -0.7
RIF1-202ENST00000414861 MTG1Q9BT17 334 aaPredicted RBP10.68□□□□□ -0.7
RIF1-202ENST00000414861 GTPBP4Q9BZE4 634 aaKnown RBP10.68□□□□□ -0.7
RIF1-202ENST00000414861 KCTD10Q9H3F6 313 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 NFE2L3Q9Y4A8 694 aa10.68□□□□□ -0.7
RIF1-202ENST00000414861 RBAK-RBAKDNI3L0D1 243 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 IKBKBO14920 756 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 AP5Z1O43299 807 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 MSCO60682 206 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 CCNE1P24864 410 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 ZNF200P98182 395 aaPredicted RBP10.67□□□□□ -0.7
RIF1-202ENST00000414861 CAPSQ13938 189 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 ZCWPW2Q504Y3 356 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 ANKRD40Q6AI12 368 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 CENPPQ6IPU0 288 aa10.67□□□□□ -0.7
RIF1-202ENST00000414861 PRPF31Q8WWY3 499 aaKnown RBP10.67□□□□□ -0.7
RIF1-202ENST00000414861 ZNF668Q96K58 619 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms