RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 ESR2Q92731 530 aa12.54□□□□□ -0.4
CRIM1-202ENST00000413985 TMEM169Q96HH4 297 aa12.54□□□□□ -0.4
CRIM1-202ENST00000413985 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
CRIM1-202ENST00000413985 VN1R3Q9BXE9 311 aa12.54□□□□□ -0.4
CRIM1-202ENST00000413985 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
CRIM1-202ENST00000413985 C1QTNF9BB2RNN3 333 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 GPR182O15218 404 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 ZIC2O95409 532 aaPredicted RBP12.53□□□□□ -0.4
CRIM1-202ENST00000413985 SSBP05455 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
CRIM1-202ENST00000413985 PROS1P07225 676 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 C1QTNF9P0C862 333 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 ITGB5P18084 799 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 KLRC1P26715 233 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
CRIM1-202ENST00000413985 NONOQ15233 471 aaKnown RBP eCLIP12.53□□□□□ -0.4
CRIM1-202ENST00000413985 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 KIAA0319LQ8IZA0 1049 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 NME8Q8N427 588 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 BBXQ8WY36 941 aaPredicted RBP12.53□□□□□ -0.4
CRIM1-202ENST00000413985 NELL1Q92832 810 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 KLHL5Q96PQ7 755 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 WDR6Q9NNW5 1121 aaKnown RBP12.53□□□□□ -0.4
CRIM1-202ENST00000413985 MAD2L2Q9UI95 211 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 IRAK3Q9Y616 596 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 NUMBLQ9Y6R0 609 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 CLUHO75153 1309 aa12.53□□□□□ -0.4
CRIM1-202ENST00000413985 MYH15Q9Y2K3 1946 aa12.52□□□□□ -0.4
CRIM1-202ENST00000413985 EVPLQ92817 2033 aa12.52□□□□□ -0.4
CRIM1-202ENST00000413985 B4E1Z4 1266 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 HOXA2O43364 376 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 CYTH3O43739 400 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 ZC3H11AO75152 810 aaKnown RBP eCLIP12.52□□□□□ -0.41
CRIM1-202ENST00000413985 CD72P21854 359 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 GPC5P78333 572 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 SHC2P98077 582 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 BMS1Q14692 1282 aaKnown RBP12.52□□□□□ -0.41
CRIM1-202ENST00000413985 UBXN2BQ14CS0 331 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 USP17L6PQ6QN14 398 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 C15orf39Q6ZRI6 1047 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 NLRX1Q86UT6 975 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 GIMAP8Q8ND71 665 aaPredicted RBP12.52□□□□□ -0.41
CRIM1-202ENST00000413985 PIBF1Q8WXW3 757 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
CRIM1-202ENST00000413985 BCO2Q9BYV7 579 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 MAN1C1Q9NR34 630 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 SLC2A4RGQ9NR83 387 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 TTC41PQ6P2S7 1318 aa12.52□□□□□ -0.41
CRIM1-202ENST00000413985 CCDC195A0A1B0GUA6 201 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 KANSL1LA0AUZ9 987 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 RFPL2O75678 378 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 VTNP04004 478 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 CNPP09543 421 aaKnown RBP12.51□□□□□ -0.41
CRIM1-202ENST00000413985 KLRC2P26717 231 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 ALDH7A1P49419 539 aaKnown RBP12.51□□□□□ -0.41
CRIM1-202ENST00000413985 HTR4Q13639 388 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 PRR23CQ6ZRP0 262 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 GET4Q7L5D6 327 aaPredicted RBP12.51□□□□□ -0.41
CRIM1-202ENST00000413985 DDX53Q86TM3 631 aaKnown RBP12.51□□□□□ -0.41
CRIM1-202ENST00000413985 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 IGSF21Q96ID5 467 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 DDX23Q9BUQ8 820 aaKnown RBP12.51□□□□□ -0.41
CRIM1-202ENST00000413985 ZMYM6O95789 1325 aa12.51□□□□□ -0.41
CRIM1-202ENST00000413985 PALM3A6NDB9 673 aaPredicted RBP12.5□□□□□ -0.41
CRIM1-202ENST00000413985 FAM170BA6NMN3 283 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 SOBPA7XYQ1 873 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 ANHXE9PGG2 379 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 INPPL1O15357 1258 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 B4GALT3O60512 393 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 GPR32O75388 356 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 PCP11498 1178 aaKnown RBP12.5□□□□□ -0.41
CRIM1-202ENST00000413985 GIT2Q14161 759 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 ZNF598Q86UK7 904 aaKnown RBP12.5□□□□□ -0.41
CRIM1-202ENST00000413985 PPFIBP1Q86W92 1011 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 GPRASP2Q96D09 838 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 BORCS6Q96GS4 357 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 ZNF668Q96K58 619 aaPredicted RBP12.5□□□□□ -0.41
CRIM1-202ENST00000413985 RNF41Q9H4P4 317 aaPredicted RBP12.5□□□□□ -0.41
CRIM1-202ENST00000413985 AZI2Q9H6S1 392 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 SEMA4GQ9NTN9 838 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
CRIM1-202ENST00000413985 MEIS2O14770 477 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 LAMP2P13473 410 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 FGFR4P22455 802 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 STAT5BP51692 787 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 CRYBB1P53674 252 aaPredicted RBP12.49□□□□□ -0.41
CRIM1-202ENST00000413985 POLGP54098 1239 aaPredicted RBP12.49□□□□□ -0.41
CRIM1-202ENST00000413985 MLF2Q15773 248 aaPredicted RBP12.49□□□□□ -0.41
CRIM1-202ENST00000413985 LONRF3Q496Y0 759 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 MCMDC2Q4G0Z9 681 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 ODR4Q5SWX8 454 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 CMASQ8NFW8 434 aaPredicted RBP12.49□□□□□ -0.41
CRIM1-202ENST00000413985 SMARCC2Q8TAQ2 1214 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 FGF14Q92915 247 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 NXPE3Q969Y0 559 aa12.49□□□□□ -0.41
CRIM1-202ENST00000413985 ZNF707Q96C28 371 aaPredicted RBP12.49□□□□□ -0.41
CRIM1-202ENST00000413985 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms