RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 KLHL23Q8NBE8 558 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 FAM174AQ8TBP5 190 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 SPPL3Q8TCT6 385 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 POF1BQ8WVV4 589 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 ZNF592Q92610 1267 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 BRF1Q92994 677 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 P2RX5Q93086 422 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 FAM86C1Q9NVL1 165 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 MAP10Q9P2G4 905 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 USP34Q70CQ2 3546 aa9.42□□□□□ -0.9
UPF3AP1-201ENST00000413731 DENND4AQ7Z401 1863 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 FAM186AA6NE01 2351 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 GOLGA8AA7E2F4 631 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 PLEKHA8P1O95397 391 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 ITGB5P18084 799 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 GNAQP50148 359 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 VCPP55072 806 aaKnown RBP9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 ZXDAP98168 799 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 EXOSC10Q01780 885 aaKnown RBP9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 NCOA4Q13772 614 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 CBX2Q14781 532 aaPredicted RBP9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 RTN1Q16799 776 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 BLOC1S3Q6QNY0 202 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 Q6ZUG5 572 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 TMTC3Q6ZXV5 915 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 BMP8AQ7Z5Y6 402 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 RBM23Q86U06 439 aaKnown RBP9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 RTN4RL1Q86UN2 441 aaPredicted RBP9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 NLRX1Q86UT6 975 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 VN1R2Q8NFZ6 395 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 GLG1Q92896 1179 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 CUL5Q93034 780 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 PPP2R3CQ969Q6 453 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 GPRASP2Q96D09 838 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 RRP36Q96EU6 259 aaKnown RBP9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 PCYT2Q99447 389 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 MAP3K14Q99558 947 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 LZTS2Q9BRK4 669 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 PRR14Q9BWN1 585 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 SPZ1Q9BXG8 430 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 ERAP1Q9NZ08 941 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 HCSTQ9UBK5 93 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 PCDHB9Q9Y5E1 797 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 TRPV2Q9Y5S1 764 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 CYP46A1Q9Y6A2 500 aa9.41□□□□□ -0.9
UPF3AP1-201ENST00000413731 IGSF9BQ9UPX0 1349 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 SCG2P13521 617 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 METAP2P50579 478 aaKnown RBP eCLIP9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 APOBRQ0VD83 1088 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 PAK2Q13177 524 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 UBE2SQ16763 222 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 TMEM266Q2M3C6 531 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 PHLDB3Q6NSJ2 640 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 XRRA1Q6P2D8 792 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 RUFY3Q7L099 469 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 SUGP1Q8IWZ8 645 aaKnown RBP9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 CMTR1Q8N1G2 835 aaKnown RBP9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 FBXL6Q8N531 539 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 FANCBQ8NB91 859 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 GIMAP8Q8ND71 665 aaPredicted RBP9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 TRAPPC12Q8WVT3 735 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 SEPT1Q8WYJ6 367 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 RPGRIP1Q96KN7 1286 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 ZFRQ96KR1 1074 aaKnown RBP9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 TMX1Q9H3N1 280 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 BRPF3Q9ULD4 1205 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 PADI3Q9ULW8 664 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 CFAP54Q96N23 3096 aa9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 PTPRZ1P23471 2315 aaPredicted RBP9.4□□□□□ -0.9
UPF3AP1-201ENST00000413731 M0QZ92 97 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 PER2O15055 1255 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 MGEA5O60502 916 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 INSRRP14616 1297 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 RCAN1P53805 252 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 ANAPC15P60006 121 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 PTK2Q05397 1052 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 SIGLEC14Q08ET2 396 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 MTMR1Q13613 665 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 NAALADL2Q58DX5 795 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 SUSD6Q92537 303 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 ASIC4Q96FT7 647 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 CDHR1Q96JP9 859 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 PHF7Q9BWX1 381 aaPredicted RBP9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 FTHL17Q9BXU8 183 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 TM6SF1Q9BZW5 370 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 SMARCAD1Q9H4L7 1026 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 JPH1Q9HDC5 661 aaPredicted RBP9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 PDRG1Q9NUG6 133 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 UBIAD1Q9Y5Z9 338 aa9.39□□□□□ -0.91
UPF3AP1-201ENST00000413731 SPTBN4Q9H254 2564 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 CNTNAP5Q8WYK1 1306 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 RIF1Q5UIP0 2472 aaKnown RBP9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 C2orf16Q68DN1 1984 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 CCDC196A0A1B0GTZ2 297 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 hCG_1642624A0A1W2PR95 340 aa9.38□□□□□ -0.91
UPF3AP1-201ENST00000413731 TBKBP1A7MCY6 615 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms