RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 ARHGEF35A5YM69 484 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 GPR182O15218 404 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 SPTLC2O15270 562 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 SCP2P22307 547 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 SFPQP23246 707 aaKnown RBP eCLIP9.14□□□□□ -0.95
RPE-204ENST00000411934 EIF4BP23588 611 aaKnown RBP9.14□□□□□ -0.95
RPE-204ENST00000411934 KCNJ6P48051 423 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 EPHB4P54760 987 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 NPEPPSP55786 919 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 KRT85P78386 507 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 PAK2Q13177 524 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 TFDP1Q14186 410 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 LPIN1Q14693 890 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 STK38Q15208 465 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 SHHQ15465 462 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 HABP4Q5JVS0 413 aaKnown RBP9.14□□□□□ -0.95
RPE-204ENST00000411934 SRGAP1Q7Z6B7 1085 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 DEFB128Q7Z7B8 93 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 CABP7Q86V35 215 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 LRRC71Q8N4P6 559 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 DBF4BQ8NFT6 615 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 KIFAP3Q92845 792 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 PYM1Q9BRP8 204 aaKnown RBP9.14□□□□□ -0.95
RPE-204ENST00000411934 GCOM2Q9BZD3 368 aaPredicted RBP9.14□□□□□ -0.95
RPE-204ENST00000411934 FTOQ9C0B1 505 aaKnown RBP eCLIP9.14□□□□□ -0.95
RPE-204ENST00000411934 SCAND2PQ9GZW5 306 aaPredicted RBP9.14□□□□□ -0.95
RPE-204ENST00000411934 ADAMTS10Q9H324 1103 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 C17orf75Q9HAS0 396 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 XPNPEP1Q9NQW7 623 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 DDX19AQ9NUU7 478 aaKnown RBP9.14□□□□□ -0.95
RPE-204ENST00000411934 CCDC39Q9UFE4 941 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 KCNG1Q9UIX4 513 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 METRNQ9UJH8 293 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 COL4A3BPQ9Y5P4 624 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 TET1Q8NFU7 2136 aa9.14□□□□□ -0.95
RPE-204ENST00000411934 TMEM150BA6NC51 233 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 USO1O60763 962 aaKnown RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 CUTAO60888 179 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 RPS6KA5O75582 802 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 VTNP04004 478 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 ACRP10323 421 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 GHRP10912 638 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 DARSP14868 501 aaKnown RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 CYP11B2P19099 503 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 GUCY2CP25092 1073 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 NLRP11P59045 1033 aaKnown RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 WDR5P61964 334 aaKnown RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 GRB10Q13322 594 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 PKP1Q13835 747 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 PPP2R5AQ15172 486 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 RAB30Q15771 203 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 C9orf50Q5SZB4 431 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 TRMT1LQ7Z2T5 733 aaKnown RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 SYT2Q8N9I0 419 aaPredicted RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 PIGOQ8TEQ8 1089 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 KCNN1Q92952 543 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 DRC1Q96MC2 740 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 TSPYL2Q9H2G4 693 aaPredicted RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 BHMT2Q9H2M3 363 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 CUEDC2Q9H467 287 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 SUGCTQ9HAC7 445 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 CHST12Q9NRB3 414 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 C1orf112Q9NSG2 853 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 SUCLA2Q9P2R7 463 aaPredicted RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 KIAA1024Q9UPX6 916 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 SLC4A7Q9Y6M7 1214 aa9.13□□□□□ -0.95
RPE-204ENST00000411934 RANBP2P49792 3224 aaKnown RBP9.13□□□□□ -0.95
RPE-204ENST00000411934 TRIOBPQ9H2D6 2365 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 PP2D1A8MPX8 630 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 AMHP03971 560 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 ATP2A2P16615 1042 aaKnown RBP9.12□□□□□ -0.95
RPE-204ENST00000411934 MARCKSP29966 332 aaPredicted RBP9.12□□□□□ -0.95
RPE-204ENST00000411934 AXLP30530 894 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 ABCD1P33897 745 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 ARL2P36404 184 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 NAMPTP43490 491 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 PHKA2P46019 1235 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 PTENP60484 403 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 ECM1Q16610 540 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 KIZQ2M2Z5 673 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 CDCA2Q69YH5 1023 aaPredicted RBP9.12□□□□□ -0.95
RPE-204ENST00000411934 FAM109BQ6ICB4 259 aaPredicted RBP9.12□□□□□ -0.95
RPE-204ENST00000411934 FAM173BQ6P4H8 233 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 CCDC73Q6ZRK6 1079 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 OTOP2Q7RTS6 562 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 FAM228AQ86W67 206 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 RHPN2Q8IUC4 686 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 SPRYD3Q8NCJ5 442 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 NLRP7Q8WX94 980 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 LARP4BQ92615 738 aaKnown RBP9.12□□□□□ -0.95
RPE-204ENST00000411934 SYMPKQ92797 1274 aaKnown RBP9.12□□□□□ -0.95
RPE-204ENST00000411934 CCDC51Q96ER9 411 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 PRIMPOLQ96LW4 560 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 SCLT1Q96NL6 688 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 OSMRQ99650 979 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 CSRNP2Q9H175 543 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 C2orf40Q9H1Z8 148 aa9.12□□□□□ -0.95
RPE-204ENST00000411934 MAGEF1Q9HAY2 307 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms