RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 PROM2Q8N271 834 aa19.64■□□□□ 0.74
HCG11-201ENST00000411553 SCG3Q8WXD2 468 aaKnown RBP19.64■□□□□ 0.74
HCG11-201ENST00000411553 DYDC2Q96IM9 177 aa19.64■□□□□ 0.74
HCG11-201ENST00000411553 SYNMO15061 1565 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 SLC16A4O15374 487 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 KIF19Q2TAC6 998 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 TMEM270Q6UE05 265 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 UBE4BO95155 1302 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 MIF4GDA9UHW6 222 aaKnown RBP19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L15C9J2P7 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L13C9JLJ4 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L11C9JVI0 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L18D6R9N7 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L22D6RA61 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L17D6RBQ6 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L19D6RCP7 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L20D6RJB6 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 SNX2O60749 519 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 GCLMP48507 274 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L24Q0WX57 530 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 USP17L6PQ6QN14 398 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 SETSIPP0DME0 302 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 ESRRAP11474 423 aaPredicted RBP19.64■□□□□ 0.73
HCG11-201ENST00000411553 UPF3AQ9H1J1 476 aaKnown RBP19.64■□□□□ 0.73
HCG11-201ENST00000411553 ARHGEF5Q12774 1597 aa19.64■□□□□ 0.73
HCG11-201ENST00000411553 NEDD4P46934 1319 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 IFNA8P32881 189 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 PDCD6IPQ8WUM4 868 aaKnown RBP19.63■□□□□ 0.73
HCG11-201ENST00000411553 TRIM15Q9C019 465 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 ZRANB2O95218 330 aaKnown RBP eCLIP19.63■□□□□ 0.73
HCG11-201ENST00000411553 CRLF3Q8IUI8 442 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 PASD1Q8IV76 773 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 SNX19Q92543 992 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 EDEM3Q9BZQ6 932 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 SYNGAP1Q96PV0 1343 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 CD2BP2O95400 341 aaKnown RBP19.63■□□□□ 0.73
HCG11-201ENST00000411553 NNMTP40261 264 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 CALR3Q96L12 384 aaKnown RBP19.63■□□□□ 0.73
HCG11-201ENST00000411553 NEMP1O14524 444 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 EEF1B2P24534 225 aaKnown RBP19.63■□□□□ 0.73
HCG11-201ENST00000411553 GPC5P78333 572 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 RHPN2Q8IUC4 686 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 TBC1D10CQ8IV04 446 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 TRAIPQ9BWF2 469 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 STK36Q9NRP7 1315 aa19.63■□□□□ 0.73
HCG11-201ENST00000411553 ESRRBO95718 433 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 PARD6BQ9BYG5 372 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 CCDC151A5D8V7 595 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 COPEO14579 308 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 TRPA1O75762 1119 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 NR1D1P20393 614 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 HOXD10P28358 340 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 GPSM2P81274 684 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 KRT80Q6KB66 452 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 MMP19Q99542 508 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 E9PMD0 336 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 ARHGDIAP52565 204 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 PTCH1Q13635 1447 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 TBXAS1P24557 533 aaPredicted RBP19.62■□□□□ 0.73
HCG11-201ENST00000411553 ACAP3Q96P50 834 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 COL15A1P39059 1388 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 P4HBP07237 508 aaKnown RBP19.62■□□□□ 0.73
HCG11-201ENST00000411553 SYNE4Q8N205 404 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 MAGEB5Q9BZ81 275 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 STAP1Q9ULZ2 295 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 HEY1Q9Y5J3 304 aa19.62■□□□□ 0.73
HCG11-201ENST00000411553 GLE1Q53GS7 698 aaKnown RBP19.61■□□□□ 0.73
HCG11-201ENST00000411553 ZBTB41Q5SVQ8 909 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 MROH7-TTC4A0A0A0MT08 1334 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
HCG11-201ENST00000411553 FAM196BA6NMK8 535 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 SDC4P31431 198 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 SWSAP1Q6NVH7 229 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 ZNF579Q8NAF0 562 aaKnown RBP19.61■□□□□ 0.73
HCG11-201ENST00000411553 ANGPTL2Q9UKU9 493 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 M0QYV0 167 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 PALMO75781 387 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 KRT38O76015 456 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 QARSP47897 775 aaKnown RBP19.61■□□□□ 0.73
HCG11-201ENST00000411553 HABP4Q5JVS0 413 aaKnown RBP19.61■□□□□ 0.73
HCG11-201ENST00000411553 ZC3H15Q8WU90 426 aaKnown RBP19.61■□□□□ 0.73
HCG11-201ENST00000411553 AFG1LQ8WV93 481 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 TRIM4Q9C037 500 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 ADRA2BP18089 450 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 TRMT10CQ7L0Y3 403 aaKnown RBP19.61■□□□□ 0.73
HCG11-201ENST00000411553 CEP95Q96GE4 821 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 HEMGNQ9BXL5 484 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 GABBR1Q9UBS5 961 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 NFU1Q9UMS0 254 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 PRR36Q9H6K5 1346 aa19.61■□□□□ 0.73
HCG11-201ENST00000411553 ATP1A3P13637 1013 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 COASYQ13057 564 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 CYP26B1Q9NR63 512 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 PVALEFA0A1B0GWK0 134 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 MAPK13O15264 365 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 MAP3K7O43318 606 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 CREB3O43889 395 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 TMPRSS15P98073 1019 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 SPP2Q13103 211 aa19.6■□□□□ 0.73
HCG11-201ENST00000411553 CPVLQ9H3G5 476 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms