RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 ING2Q9H160 280 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 MUC3BQ9H195 1237 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 UNC45AQ9H3U1 944 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 ADORA2BP29275 332 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 PDCLQ13371 301 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 ARMC6Q6NXE6 501 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 TSSK1BQ9BXA7 367 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 CCDC90BQ9GZT6 254 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 MCF2P10911 925 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 HDLBPQ00341 1268 aaKnown RBP11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 UBE3AQ05086 875 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 PI16Q6UXB8 463 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 CATSPER3Q86XQ3 398 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 DPF3Q92784 378 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 LRRC37BQ96QE4 947 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 ECEL1O95672 775 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 GCKP35557 465 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 PHKG1Q16816 387 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 TRIM48Q8IWZ4 208 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 TRIM54Q9BYV2 358 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 PTPRTO14522 1441 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 NPHP4O75161 1426 aaPredicted RBP11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 FAM135BQ49AJ0 1406 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 RNF123Q5XPI4 1314 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 RASGRF2O14827 1237 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 TJP3O95049 919 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 C16orf72Q14CZ0 275 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 CYFIP1Q7L576 1253 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 RFWD2Q8NHY2 731 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 THOC1Q96FV9 657 aaKnown RBP11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 MAGEB10Q96LZ2 347 aaPredicted RBP11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 ASPSCR1Q9BZE9 553 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 ANTXR1Q9H6X2 564 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 CHD1O14646 1710 aa11.99□□□□□ -0.49
PRPF40A-202ENST00000410080 SHROOM2Q13796 1616 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 RALAP11233 206 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 CLCN1P35523 988 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 COPB2P35606 906 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 ZNF157P51786 506 aaPredicted RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 APOBEC3FQ8IUX4 373 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 CCHCR1Q8TD31 782 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 TOPORSQ9NS56 1045 aaPredicted RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 CRLF3Q8IUI8 442 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 DDIASQ8IXT1 998 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 C1orf131Q8NDD1 294 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 KIAA1468Q9P260 1216 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 NLRP1Q9C000 1473 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 ABCC4O15439 1325 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 PJA2O43164 708 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 SNRNP48Q6IEG0 339 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 C11orf74Q86VG3 221 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 SEPT12Q8IYM1 358 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 VPS39Q96JC1 886 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 SLC25A13Q9UJS0 675 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 GTPBP6O43824 516 aaPredicted RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 IMPDH2P12268 514 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 MAPK6Q16659 721 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 GRAMD1CQ8IYS0 662 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 HOXC10Q9NYD6 342 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 SCOCQ9UIL1 159 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 PER1O15534 1290 aaPredicted RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 SMARCA1P28370 1054 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 AKT1P31749 480 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 ORC4O43929 436 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 ACSL3O95573 720 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 GUCA1CO95843 209 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 PDIA3P30101 505 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 PRAMEP78395 509 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 ZNF589Q86UQ0 364 aaPredicted RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 TBC1D19Q8N5T2 526 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 DDX50Q9BQ39 737 aaKnown RBP11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 MAGEB5Q9BZ81 275 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
PRPF40A-202ENST00000410080 FAM47DPA6NHR8 397 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 PFKFB2O60825 505 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 GH2P01242 217 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 HMBSP08397 361 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 ZNF667Q5HYK9 610 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 SPATA2LQ8IUW3 424 aaPredicted RBP11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 MTIF3Q9H2K0 278 aaKnown RBP11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 AIPL1Q9NZN9 384 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 PCDHB8Q9UN66 801 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 FBXW10Q5XX13 1052 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 DISP1Q96F81 1524 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 ZRANB2O95218 330 aaKnown RBP eCLIP11.97□□□□□ -0.496e-7■□□□□ 8.7
PRPF40A-202ENST00000410080 CHAMP1Q96JM3 812 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 EPB41L5Q9HCM4 733 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 SLC9A1P19634 815 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 TMEM161AQ9NX61 479 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 PLA2G4BP0C869 781 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 TNFAIP2Q03169 654 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 SLFN12LQ6IEE8 588 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 FANCLQ9NW38 375 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 IQANK1A0A1B0GTG1 560 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 ANGPT1Q15389 498 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 OR6P1Q8NGX9 317 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 SCG3Q8WXD2 468 aaKnown RBP11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 METP08581 1390 aa11.97□□□□□ -0.49
PRPF40A-202ENST00000410080 IKBKBO14920 756 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms