RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 TMEM62Q0P6H9 643 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 KCNB1Q14721 858 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 L1TD1Q5T7N2 865 aaKnown RBP13.92□□□□□ -0.18
PMS1-204ENST00000409823 CNNM4Q6P4Q7 775 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 CCDC47Q96A33 483 aaKnown RBP13.92□□□□□ -0.18
PMS1-204ENST00000409823 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
PMS1-204ENST00000409823 IKZF4Q9H2S9 585 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 ANO10Q9NW15 660 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 HAS3O00219 553 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 TREHO43280 583 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 GCNT3O95395 438 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 EHHADHQ08426 723 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 MTHFD1LQ6UB35 978 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 NELFCDQ8IXH7 590 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 FAM178BQ8IXR5 827 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 PCSK9Q8NBP7 692 aaKnown RBP13.92□□□□□ -0.18
PMS1-204ENST00000409823 MCPH1Q8NEM0 835 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 PRPF31Q8WWY3 499 aaKnown RBP13.92□□□□□ -0.18
PMS1-204ENST00000409823 ODF2LQ9ULJ1 636 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 GRIN2DO15399 1336 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 SLC16A4O15374 487 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 VTNP04004 478 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 SRGAP2CP0DJJ0 459 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 NFRKBQ6P4R8 1299 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 RHPN2Q8IUC4 686 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 DRC1Q96MC2 740 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 KATNAL1Q9BW62 490 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 GINS2Q9Y248 185 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 PCDHA2Q9Y5H9 948 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 PLS3P13797 630 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 RFC5P40937 340 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 ZNF165P49910 485 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 ZNF131P52739 623 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 LARSQ9P2J5 1176 aaKnown RBP13.91□□□□□ -0.18
PMS1-204ENST00000409823 SUCLA2Q9P2R7 463 aaPredicted RBP13.91□□□□□ -0.18
PMS1-204ENST00000409823 USP20Q9Y2K6 914 aa13.91□□□□□ -0.18
PMS1-204ENST00000409823 NRCAMQ92823 1304 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 PPP1R3GB7ZBB8 358 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 CSDE1O75534 798 aaKnown RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 PRPF6O94906 941 aaKnown RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 GLRA2P23416 452 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 CST5P28325 142 aaPredicted RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 NPTX2P47972 431 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 HSP90AA4PQ58FG1 418 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 RUFY4Q6ZNE9 571 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 LUZP1Q86V48 1076 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 TRIML1Q8N9V2 468 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 ARRDC4Q8NCT1 418 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 U2AF1L4Q8WU68 220 aaKnown RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 FIZ1Q96SL8 496 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 AKT3Q9Y243 479 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 ADGRA3Q8IWK6 1321 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 A0A1W2PQ45 241 aaPredicted RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 A0A1W2PQY0 241 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 TRIM49BA6NDI0 452 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 LRRIQ4A6NIV6 560 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 K7ENM7 598 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 KPNA6O60684 536 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 TFRCP02786 760 aaKnown RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 NKX3-2P78367 333 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 DMP1Q13316 513 aaPredicted RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 PKN2Q16513 984 aaKnown RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 GDF6Q6KF10 455 aaPredicted RBP13.9□□□□□ -0.18
PMS1-204ENST00000409823 KIFAP3Q92845 792 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 GLT1D1Q96MS3 346 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 CTNND2Q9UQB3 1225 aa13.9□□□□□ -0.18
PMS1-204ENST00000409823 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 KBTBD13C9JR72 458 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 PMS1P54277 932 aaKnown RBP13.89□□□□□ -0.19
PMS1-204ENST00000409823 ITGA7Q13683 1181 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 RETREG2Q8NC44 543 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 SCFD1Q8WVM8 642 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 IGKV6-21A0A0C4DH24 114 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 ARL2P36404 184 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 LAMTOR4Q0VGL1 99 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 ZNF720Q7Z2F6 126 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 MLKLQ8NB16 471 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 PSPC1Q8WXF1 523 aaKnown RBP13.89□□□□□ -0.19
PMS1-204ENST00000409823 MED15Q96RN5 788 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 MCOLN1Q9GZU1 580 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 KMT5AQ9NQR1 393 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 STARD7Q9NQZ5 370 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 TRMT13Q9NUP7 481 aaKnown RBP13.89□□□□□ -0.19
PMS1-204ENST00000409823 ARID2Q68CP9 1835 aa13.89□□□□□ -0.19
PMS1-204ENST00000409823 CYP2C9P11712 490 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 GAP43P17677 238 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 CAPSQ13938 189 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 ADSSL1Q8N142 457 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 AOPEPQ8N6M6 819 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 DNAJB3Q8WWF6 145 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 IFT74Q96LB3 600 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 CBX8Q9HC52 389 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 OLFML3Q9NRN5 406 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 GTF2IRD1Q9UHL9 959 aa13.88□□□□□ -0.19
PMS1-204ENST00000409823 EVPLQ92817 2033 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms