RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 ANKRD13CQ8N6S4 541 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 FAM172AQ8WUF8 416 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 DEPDC1BQ8WUY9 529 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 EDC3Q96F86 508 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 C11orf84Q9BUA3 381 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 IMPG2Q9BZV3 1241 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 HAUS2Q9NVX0 235 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 NSMCE4AQ9NXX6 385 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 AFF4Q9UHB7 1163 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 SRP68Q9UHB9 627 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 VPS51Q9UID3 782 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 TMCO1Q9UM00 188 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 DIS3Q9Y2L1 958 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 FAM86C2PA6NEL3 165 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 TRIM66O15016 1216 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 SMAD9O15198 467 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 CFLARO15519 480 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 VAMP4O75379 141 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 ITGA3P26006 1051 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 IFNAR2P48551 515 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 ZNF165P49910 485 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 VASPP50552 380 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 MARSP56192 900 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 POU5F1Q01860 360 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 ITKQ08881 620 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 INPP5AQ14642 412 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 SPDYE7PQ495Y7 208 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 ARHGEF16Q5VV41 709 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 DEF8Q6ZN54 512 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 SLC44A2Q8IWA5 706 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 DIS3L2Q8IYB7 885 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 CAPSLQ8WWF8 208 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 CKAP2Q8WWK9 683 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 ZNF597Q96LX8 424 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 CYTH2Q99418 400 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 NUDT12Q9BQG2 462 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 ZSCAN16Q9H4T2 348 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 GPBP1L1Q9HC44 474 aaPredicted RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 ANAPC7Q9UJX3 599 aa4.38□□□□□ -1.71
RGPD1-202ENST00000409776 R3HDM2Q9Y2K5 976 aaKnown RBP4.38□□□□□ -1.71
RGPD1-202ENST00000409776 FAM83GA6ND36 823 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 GRXCR2A6NFK2 248 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 POU2F2P09086 479 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 GPD2P43304 727 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 ADKP55263 362 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 SRLQ86TD4 932 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 ERICH1Q86X53 443 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 TCP11L2Q8N4U5 519 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 DEPDC7Q96QD5 511 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 BBS2Q9BXC9 721 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 NACAP1Q9BZK3 213 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 PIH1D3Q9NQM4 214 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 TYW1Q9NV66 732 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 ZNF69Q9UC07 566 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 ZC3H7BQ9UGR2 993 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 ING4Q9UNL4 249 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 TDRKHQ9Y2W6 561 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 UBXN8O00124 270 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 SASH3O75995 380 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 APOC1P02654 83 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 SKIV2L2P42285 1042 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 CASP4P49662 377 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 STARP49675 285 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 RAB2AP61019 212 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 SEMA3FQ13275 785 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 IQCB1Q15051 598 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 KLC3Q6P597 504 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 KCNIP4Q6PIL6 250 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 TAS2R42Q7RTR8 314 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 KSR1Q8IVT5 923 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 FAM45AQ8TCE6 357 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 HES6Q96HZ4 224 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 BTBD6Q96KE9 485 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 OSBPL1AQ9BXW6 950 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 MOB1AQ9H8S9 216 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 FGFR1OP2Q9NVK5 253 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 SH3BGRL2Q9UJC5 107 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 EXOGQ9Y2C4 368 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 DGKBQ9Y6T7 804 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 PALMO75781 387 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 NCAM1P13591 858 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 ATP12AP54707 1039 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 NCBP1Q09161 790 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 EIF4A2Q14240 407 aaKnown RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 TRIP4Q15650 581 aaPredicted RBP4.37□□□□□ -1.71
RGPD1-202ENST00000409776 ATP13A4Q4VNC1 1196 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 C2CD6Q53TS8 623 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 TTC22Q5TAA0 569 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 CRTC1Q6UUV9 634 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 NUP54Q7Z3B4 507 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 NELFCDQ8IXH7 590 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 CKAP2LQ8IYA6 745 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 CCDC26Q8TAB7 109 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 VPS25Q9BRG1 176 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 AGXT2Q9BYV1 514 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 VPS45Q9NRW7 570 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 BTBD7Q9P203 1132 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 AURKCQ9UQB9 309 aa4.37□□□□□ -1.71
RGPD1-202ENST00000409776 SH3GLB1Q9Y371 365 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms