RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 JCADQ9P266 1359 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 UCHL3P15374 230 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 ORC2Q13416 577 aaPredicted RBP17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 ACER1Q8TDN7 264 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 RICTORQ6R327 1708 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 SH2D3CQ8N5H7 860 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 WHAMMQ8TF30 809 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 MTMR2Q13614 643 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 TMED2Q15363 201 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 GPR162Q16538 588 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 CDO1Q16878 200 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 CEP128Q6ZU80 1094 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 LACRTQ9GZZ8 138 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 ITIH6Q6UXX5 1313 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 CNGA1P29973 690 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 ANKRD20A3Q5VUR7 823 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 CATSPER3Q86XQ3 398 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 MCUR1Q96AQ8 359 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 MED10Q9BTT4 135 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 ZWILCHQ9H900 591 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 ADAM22Q9P0K1 906 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 KLHL14Q9P2G3 628 aa17.75■□□□□ 0.43
PTPRN2-205ENST00000409483 CAPN9O14815 690 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 RWDD2BP57060 319 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 SLC10A5Q5PT55 438 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 COG1Q8WTW3 980 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 AGBL1Q96MI9 1066 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 TTC7AQ9ULT0 858 aaPredicted RBP17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 BASP1P80723 227 aaKnown RBP17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 RNF25Q96BH1 459 aaPredicted RBP17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 RILPQ96NA2 401 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 SAT1P21673 171 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 ATP11AP98196 1134 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 CCDC14Q49A88 953 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 PLA2G4FQ68DD2 849 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 NME8Q8N427 588 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 RNF10Q8N5U6 811 aaKnown RBP17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 FAM49AQ9H0Q0 323 aaPredicted RBP17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 NOC2LQ9Y3T9 749 aaKnown RBP17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 RASGRF2O14827 1237 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 CYP26A1O43174 497 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 RHOT2Q8IXI1 618 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 NYAP2Q9P242 653 aa17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
PTPRN2-205ENST00000409483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■■■□□ 15.1
PTPRN2-205ENST00000409483 KLRC1P26715 233 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 GPC5P78333 572 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 GEN1Q17RS7 908 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 ALS2CLQ60I27 953 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 HHIPL2Q6UWX4 724 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 SLC30A5Q8TAD4 765 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 STMN2Q93045 179 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 ANKRD36BP1Q96IX9 119 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 RPAP3Q9H6T3 665 aaPredicted RBP17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 TBC1D22BQ9NU19 505 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 WDR91A4D1P6 747 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 SLC18A3Q16572 532 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 PRMT6Q96LA8 375 aaPredicted RBP17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 RBM12Q9NTZ6 932 aaKnown RBP17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 SUGT1Q9Y2Z0 365 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 PDXKO00764 312 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 CLDN3O15551 220 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 TAF12Q16514 161 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 DDTLA6NHG4 134 aaPredicted RBP17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 STK10O94804 968 aaKnown RBP17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 NPEPPSP55786 919 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 NLRP7Q8WX94 980 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 TBC1D31Q96DN5 1066 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 NUP85Q9BW27 656 aa17.73■□□□□ 0.43
PTPRN2-205ENST00000409483 BMP6P22004 513 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 PSMC4P43686 418 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 BAATQ14032 418 aaPredicted RBP17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 VPS52Q8N1B4 723 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 NSUN6Q8TEA1 469 aaKnown RBP17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 RUNDC3BQ96NL0 473 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 PPP1R12CQ9BZL4 782 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 CYTH3O43739 400 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 MED24O75448 989 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 SLC17A8Q8NDX2 589 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 PNKPQ96T60 521 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 EVI5O60447 810 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 GALCP54803 685 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 EPHA7Q15375 998 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 FAM133BQ5BKY9 247 aaKnown RBP17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 OR6B2Q6IFH4 312 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 TTI2Q6NXR4 508 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 TRIM50Q86XT4 487 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 TCP11Q8WWU5 503 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 CCDC188H7C350 402 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 SOX5P35711 763 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 JAK3P52333 1124 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 BBS9Q3SYG4 887 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 LRP10Q7Z4F1 713 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 FBXL16Q8N461 479 aa17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 ZNF564Q8TBZ8 553 aaPredicted RBP17.72■□□□□ 0.43
PTPRN2-205ENST00000409483 P3H4Q92791 437 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms