RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 GRIN1Q05586 938 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 MKRN4PQ13434 485 aaPredicted RBP23.15■■□□□ 1.3
C4orf48-201ENST00000409248 CSPP1Q1MSJ5 1256 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 KRT79Q5XKE5 535 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 DEFB123Q8N688 67 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 PPP1R16BQ96T49 567 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 OSMRQ99650 979 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 FTHL17Q9BXU8 183 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 CSRNP2Q9H175 543 aa23.15■■□□□ 1.3
C4orf48-201ENST00000409248 DHX33Q9H6R0 707 aaKnown RBP23.15■■□□□ 1.3
C4orf48-201ENST00000409248 MUTP22033 750 aa23.14■■□□□ 1.29
C4orf48-201ENST00000409248 RPA1P27694 616 aa23.14■■□□□ 1.29
C4orf48-201ENST00000409248 PBX2P40425 430 aa23.14■■□□□ 1.29
C4orf48-201ENST00000409248 NLRP11P59045 1033 aaKnown RBP23.14■■□□□ 1.29
C4orf48-201ENST00000409248 EMC2Q15006 297 aa23.14■■□□□ 1.29
C4orf48-201ENST00000409248 SNX29Q8TEQ0 813 aa23.14■■□□□ 1.29
C4orf48-201ENST00000409248 CLIC6Q96NY7 704 aa23.14■■□□□ 1.29
C4orf48-201ENST00000409248 AGO3Q9H9G7 860 aaKnown RBP23.14■■□□□ 1.29
C4orf48-201ENST00000409248 GDPD2Q9HCC8 539 aa23.14■■□□□ 1.29
C4orf48-201ENST00000409248 PP2D1A8MPX8 630 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 GPR32O75388 356 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 RPS6KA5O75582 802 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 SPATA31C1P0DKV0 1188 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 XRCC6P12956 609 aaKnown RBP eCLIP23.13■■□□□ 1.29
C4orf48-201ENST00000409248 CCT6AP40227 531 aaKnown RBP23.13■■□□□ 1.29
C4orf48-201ENST00000409248 UBA7P41226 1012 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 GPC3P51654 580 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 RABGGTBP53611 331 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 CATSPER3Q86XQ3 398 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 MYOCDQ8IZQ8 938 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 ZNF579Q8NAF0 562 aaKnown RBP23.13■■□□□ 1.29
C4orf48-201ENST00000409248 TCP11Q8WWU5 503 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 ZBED2Q9BTP6 218 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 SUCLA2Q9P2R7 463 aaPredicted RBP23.13■■□□□ 1.29
C4orf48-201ENST00000409248 PADI3Q9ULW8 664 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 PCDHA7Q9UN72 937 aa23.13■■□□□ 1.29
C4orf48-201ENST00000409248 LAMA2P24043 3122 aaKnown RBP23.12■■□□□ 1.29
C4orf48-201ENST00000409248 GPR182O15218 404 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 TLL1O43897 1013 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 MED24O75448 989 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 TXLNAP40222 546 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 POTEGQ6S5H5 508 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.12■■□□□ 1.29
C4orf48-201ENST00000409248 Q7L0L9 218 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 ZNF410Q86VK4 478 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 TMEM40Q8WWA1 233 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 NLRP7Q8WX94 980 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 PSPC1Q8WXF1 523 aaKnown RBP23.12■■□□□ 1.29
C4orf48-201ENST00000409248 NACC1Q96RE7 527 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 MTRQ99707 1265 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 ADAMTS10Q9H324 1103 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 SLC28A3Q9HAS3 691 aa23.12■■□□□ 1.29
C4orf48-201ENST00000409248 SLC26A4O43511 780 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 DGAT1O75907 488 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 GJB5O95377 273 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 CDC25AP30304 524 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 RARRES1P49788 294 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 NFX1Q12986 1120 aaKnown RBP23.11■■□□□ 1.29
C4orf48-201ENST00000409248 DRP2Q13474 957 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 AXDND1Q5T1B0 1012 aaPredicted RBP23.11■■□□□ 1.29
C4orf48-201ENST00000409248 CABP7Q86V35 215 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 RASSF8Q8NHQ8 419 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 PIGOQ8TEQ8 1089 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 GBP4Q96PP9 640 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 NKX2-4Q9H2Z4 354 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 CDHR5Q9HBB8 845 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 ATP6V0A4Q9HBG4 840 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 ERVK-5Q9HDB9 667 aa23.11■■□□□ 1.29
C4orf48-201ENST00000409248 DBR1Q9UK59 544 aaKnown RBP23.11■■□□□ 1.29
C4orf48-201ENST00000409248 YBX2Q9Y2T7 364 aaKnown RBP23.11■■□□□ 1.29
C4orf48-201ENST00000409248 NOC2LQ9Y3T9 749 aaKnown RBP23.11■■□□□ 1.29
C4orf48-201ENST00000409248 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.1■■□□□ 1.29
C4orf48-201ENST00000409248 ZBTB39O15060 712 aa23.1■■□□□ 1.29
C4orf48-201ENST00000409248 EIF4BP23588 611 aaKnown RBP23.1■■□□□ 1.29
C4orf48-201ENST00000409248 SPECC1Q5M775 1068 aa23.1■■□□□ 1.29
C4orf48-201ENST00000409248 PPP2R2DQ66LE6 453 aa23.1■■□□□ 1.29
C4orf48-201ENST00000409248 RHPN2Q8IUC4 686 aa23.1■■□□□ 1.29
C4orf48-201ENST00000409248 SYMPKQ92797 1274 aaKnown RBP23.1■■□□□ 1.29
C4orf48-201ENST00000409248 CDK5RAP3Q96JB5 506 aa23.1■■□□□ 1.29
C4orf48-201ENST00000409248 GCOM2Q9BZD3 368 aaPredicted RBP23.1■■□□□ 1.29
C4orf48-201ENST00000409248 BMP2KQ9NSY1 1161 aaPredicted RBP23.1■■□□□ 1.29
C4orf48-201ENST00000409248 COL4A3BPQ9Y5P4 624 aa23.1■■□□□ 1.29
C4orf48-201ENST00000409248 DARSP14868 501 aaKnown RBP23.09■■□□□ 1.29
C4orf48-201ENST00000409248 ZRSR1Q15695 479 aaKnown RBP23.09■■□□□ 1.29
C4orf48-201ENST00000409248 ADALQ6DHV7 355 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 CLEC17AQ6ZS10 378 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 FAM228AQ86W67 206 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 CALML4Q96GE6 196 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 NLRP4Q96MN2 994 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 RAD9AQ99638 391 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 MMTAG2Q9BU76 263 aaKnown RBP23.09■■□□□ 1.29
C4orf48-201ENST00000409248 CCSER1Q9C0I3 900 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 TSPYL2Q9H2G4 693 aaPredicted RBP23.09■■□□□ 1.29
C4orf48-201ENST00000409248 TTYH1Q9H313 450 aaPredicted RBP23.09■■□□□ 1.29
C4orf48-201ENST00000409248 ZNF576Q9H609 170 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 ST3GAL5Q9UNP4 418 aa23.09■■□□□ 1.29
C4orf48-201ENST00000409248 GOLGA6L4A6NEF3 574 aa23.08■■□□□ 1.29
C4orf48-201ENST00000409248 CA3P07451 260 aa23.08■■□□□ 1.29
C4orf48-201ENST00000409248 FAM117BQ6P1L5 589 aa23.08■■□□□ 1.29
C4orf48-201ENST00000409248 TMCO2Q7Z6W1 182 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms