RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 GALNT8Q9NY28 637 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 TFCP2L1Q9NZI6 479 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 BCAP29Q9UHQ4 241 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 RWDD2AQ9UIY3 292 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PACSIN2Q9UNF0 486 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 A0A1B0GTH6 734 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 CCDC188H7C350 402 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PSMD14O00487 310 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PPEF1O14829 653 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 APOEP02649 317 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 ACADSP16219 412 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 VHLP40337 213 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PPP4CP60510 307 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 DR1Q01658 176 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 BTKQ06187 659 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 RESP18Q5W5W9 173 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 TMTC3Q6ZXV5 915 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 NELFCDQ8IXH7 590 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 KIAA2013Q8IYS2 634 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 UPF1Q92900 1129 aaKnown RBP eCLIP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 TMEM60Q9H2L4 133 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 GPHNQ9NQX3 736 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 ZC4H2Q9NQZ6 224 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 ARPP21Q9UBL0 812 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 LOC285556D6RIA3 1793 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PLIN4Q96Q06 1357 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 MYO3BQ8WXR4 1341 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PASKQ96RG2 1323 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 TBCAO75347 108 aaKnown RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 GMNNO75496 209 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 KRT75O95678 551 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 DMPKQ09013 629 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PTGDRQ13258 359 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 TRPC3Q13507 836 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 LETM2Q2VYF4 491 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 CWF19L1Q69YN2 538 aaKnown RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 KCNV1Q6PIU1 500 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 MMGT1Q8N4V1 131 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PROCA1Q8NCQ7 364 aaPredicted RBP6.3□□□□□ -1.4
HDAC9-203ENST00000406072 PIGOQ8TEQ8 1089 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 NLRP7Q8WX94 980 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 CASP10Q92851 521 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 KIFC2Q96AC6 838 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 COA1Q9GZY4 146 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 TBC1D7Q9P0N9 293 aa6.3□□□□□ -1.4
HDAC9-203ENST00000406072 GPAA1O43292 621 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 RTN3O95197 1032 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 FGGP02679 453 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 GSTA1P08263 222 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 PMS2P54278 862 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 PSMC1P62191 440 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 AP2B1P63010 937 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 KPNB1Q14974 876 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SHC4Q6S5L8 630 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 TRAPPC11Q7Z392 1133 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 METTL16Q86W50 562 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 DDX42Q86XP3 938 aaKnown RBP eCLIP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 WDR60Q8WVS4 1066 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 RUBCNQ92622 972 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 PRCCQ92733 491 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 PAGE5Q96GU1 130 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 RPS6KC1Q96S38 1066 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 IWS1Q96ST2 819 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 MPHOSPH6Q99547 160 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 MRPL46Q9H2W6 279 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 KCND1Q9NSA2 647 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 AMACRQ9UHK6 382 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 MYH2Q9UKX2 1941 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SBF1O95248 1867 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 FOXP2O15409 715 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 HAUS5O94927 633 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 ADORA1P30542 326 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 GSTT1P30711 240 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SCNN1BP51168 640 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 IGBP1P78318 339 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SKOR1P84550 965 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 PDE4BQ07343 736 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 MMEL1Q495T6 779 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 CRELD2Q6UXH1 353 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 LRIG3Q6UXM1 1119 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 ZNF804AQ7Z570 1209 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 NUDCD3Q8IVD9 361 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 RPGRQ92834 1020 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 THAP11Q96EK4 314 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SPATA17Q96L03 361 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 NT5C3AQ9H0P0 336 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 IL25Q9H293 177 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SH2D4AQ9H788 454 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 SLC39A2Q9NP94 309 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 EHD2Q9NZN4 543 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 STX8Q9UNK0 236 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 TMA7Q9Y2S6 64 aaKnown RBP6.29□□□□□ -1.4
HDAC9-203ENST00000406072 ADAMTSL1Q8N6G6 1762 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 MAST3O60307 1309 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 LGALS16A8MUM7 142 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 NDC80O14777 642 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 ECEL1O95672 775 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 IFNB1P01574 187 aa6.29□□□□□ -1.4
HDAC9-203ENST00000406072 GYPCP04921 128 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms