RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 COG2Q14746 738 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 KDM7AQ6ZMT4 941 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 PEX26Q7Z412 305 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 RASGEF1CQ8N431 466 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 MYCT1Q8N699 235 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 AP1M1Q9BXS5 423 aa17.07■□□□□ 0.32
TOM1-203ENST00000404284 SUCLA2Q9P2R7 463 aaPredicted RBP17.07■□□□□ 0.32
TOM1-203ENST00000404284 TRPC5Q9UL62 973 aaPredicted RBP17.07■□□□□ 0.32
TOM1-203ENST00000404284 FRMPD4Q14CM0 1322 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 F8VZ95 297 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 PPP2R5CQ13362 524 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 EMC10Q5UCC4 262 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 LRCH2Q5VUJ6 765 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 NT5DC3Q86UY8 548 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 COL23A1Q86Y22 540 aaPredicted RBP17.06■□□□□ 0.32
TOM1-203ENST00000404284 TPH2Q8IWU9 490 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 C1orf131Q8NDD1 294 aaKnown RBP17.06■□□□□ 0.32
TOM1-203ENST00000404284 U2AF1L4Q8WU68 220 aaKnown RBP17.06■□□□□ 0.32
TOM1-203ENST00000404284 TDRD3Q9H7E2 651 aaKnown RBP17.06■□□□□ 0.32
TOM1-203ENST00000404284 SART1O43290 800 aaKnown RBP17.06■□□□□ 0.32
TOM1-203ENST00000404284 CHMP2AO43633 222 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 STAT1P42224 750 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 NPEPPSP55786 919 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 CUL1Q13616 776 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 KIAA1755Q5JYT7 1200 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
TOM1-203ENST00000404284 KSR1Q8IVT5 923 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 JPH2Q9BR39 696 aaPredicted RBP17.06■□□□□ 0.32
TOM1-203ENST00000404284 SYT11Q9BT88 431 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 MKNK1Q9BUB5 465 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 DDX47Q9H0S4 455 aaKnown RBP17.06■□□□□ 0.32
TOM1-203ENST00000404284 PARVGQ9HBI0 331 aa17.06■□□□□ 0.32
TOM1-203ENST00000404284 A6NNZ2 444 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 TMCO5BA8MYB1 307 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 SOX5P35711 763 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 FMO5P49326 533 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 ATP1A2P50993 1020 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 ZNF131P52739 623 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 GALCP54803 685 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 TUBB8Q3ZCM7 444 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 SLC5A5Q92911 643 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 HES6Q96HZ4 224 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 RNPC3Q96LT9 517 aaKnown RBP17.05■□□□□ 0.32
TOM1-203ENST00000404284 GPR88Q9GZN0 384 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 WRAP73Q9P2S5 460 aaPredicted RBP17.05■□□□□ 0.32
TOM1-203ENST00000404284 PLAAQ9Y263 795 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 NCANO14594 1321 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 ENTPD3O75355 529 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 ECE1P42892 770 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 HLTFQ14527 1009 aaKnown RBP eCLIP17.05■□□□□ 0.32
TOM1-203ENST00000404284 LMBR1Q8WVP7 490 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 NEUROG2Q9H2A3 272 aa17.05■□□□□ 0.32
TOM1-203ENST00000404284 COL2A1P02458 1487 aaPredicted RBP17.05■□□□□ 0.32
TOM1-203ENST00000404284 CCDC188H7C350 402 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 CFBP00751 764 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 MMP10P09238 476 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 ITGA4P13612 1032 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 USP8P40818 1118 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 STAT2P52630 851 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 UAP1Q16222 522 aaPredicted RBP17.04■□□□□ 0.32
TOM1-203ENST00000404284 CBWD6Q4V339 395 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 CBWD3Q5JTY5 395 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 CBWD5Q5RIA9 395 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 DAAM2Q86T65 1068 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 DDX42Q86XP3 938 aaKnown RBP eCLIP17.04■□□□□ 0.326e-6■■■■■ 27.6
TOM1-203ENST00000404284 GLYCTKQ8IVS8 523 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 SYCE1Q8N0S2 351 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 ATP6V1G3Q96LB4 118 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 DMAC2Q9NW81 257 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 SYNPO2Q9UMS6 1093 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 BRWD3Q6RI45 1802 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 UBE4BO95155 1302 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 EBAG9O00559 213 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 PPP1R12BO60237 982 aaPredicted RBP17.04■□□□□ 0.32
TOM1-203ENST00000404284 NR1D1P20393 614 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 PRELPP51888 382 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 DRAP1Q14919 205 aaPredicted RBP17.04■□□□□ 0.32
TOM1-203ENST00000404284 ZNF720Q7Z2F6 126 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 PROCA1Q8NCQ7 364 aaPredicted RBP17.04■□□□□ 0.32
TOM1-203ENST00000404284 RNF217Q8TC41 542 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 STK33Q9BYT3 514 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 OSGEPQ9NPF4 335 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 SEL1LQ9UBV2 794 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 DNAJC12Q9UKB3 198 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 IGSF9BQ9UPX0 1349 aa17.04■□□□□ 0.32
TOM1-203ENST00000404284 KRIT1O00522 736 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 HSD17B3P37058 310 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 CEP120Q8N960 986 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 FAM107BQ9H098 131 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 AGPAT3Q9NRZ7 376 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 H0YGN5 161 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 CEP85LQ5SZL2 805 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 LRIG3Q6UXM1 1119 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 GIMAP7Q8NHV1 300 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 RFFLQ8WZ73 363 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 SGSM3Q96HU1 749 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 NFS1Q9Y697 457 aa17.03■□□□□ 0.32
TOM1-203ENST00000404284 HMGB1P1B2RPK0 211 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms