RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 GDF3Q9NR23 364 aa15.35■□□□□ 0.05
ATG3-202ENST00000402314 FBXL5Q9UKA1 691 aa15.35■□□□□ 0.05
ATG3-202ENST00000402314 CYP3A7-CYP3A51PA0A087WV96 503 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 TMCO5BA8MYB1 307 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 EZRP15311 586 aaKnown RBP15.34■□□□□ 0.05
ATG3-202ENST00000402314 CYP3A7P24462 503 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 NMT1P30419 496 aaKnown RBP15.34■□□□□ 0.05
ATG3-202ENST00000402314 COPB2P35606 906 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 MYO1EQ12965 1108 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 STAMBPL1Q96FJ0 436 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 TACO1Q9BSH4 297 aaKnown RBP15.34■□□□□ 0.05
ATG3-202ENST00000402314 ABCB11O95342 1321 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 MYBL1P10243 752 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 PTK2Q05397 1052 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 COG2Q14746 738 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 UAP1Q16222 522 aaPredicted RBP15.34■□□□□ 0.05
ATG3-202ENST00000402314 KRT71Q3SY84 523 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 ANKRD20A8PQ5CZ79 823 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 MAEAQ7L5Y9 396 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 TBC1D1Q86TI0 1168 aaPredicted RBP15.34■□□□□ 0.05
ATG3-202ENST00000402314 SLFN12Q8IYM2 578 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 EIF2AK1Q9BQI3 630 aaKnown RBP15.34■□□□□ 0.05
ATG3-202ENST00000402314 IDI2Q9BXS1 227 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 GANQ9H2C0 597 aa15.34■□□□□ 0.05
ATG3-202ENST00000402314 CCDC189A1A4V9 331 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 YDJCA8MPS7 323 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 SERPING1P05155 500 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 RPA1P27694 616 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 PLS1Q14651 629 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 RBM26Q5T8P6 1007 aaKnown RBP15.33■□□□□ 0.05
ATG3-202ENST00000402314 MIGA2Q7L4E1 593 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 CACNA2D3Q8IZS8 1091 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 AKT1S1Q96B36 256 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 HVCN1Q96D96 273 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 CEP63Q96MT8 703 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 MBOAT7Q96N66 472 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 WDR18Q9BV38 432 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 GOPCQ9HD26 462 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 FBXO28Q9NVF7 368 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 ARMCX3Q9UH62 379 aaPredicted RBP15.33■□□□□ 0.05
ATG3-202ENST00000402314 AMACRQ9UHK6 382 aa15.33■□□□□ 0.05
ATG3-202ENST00000402314 LRRC37AA6NMS7 1700 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 DAPK3O43293 454 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 ITGA4P13612 1032 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 KNOP1Q1ED39 458 aaKnown RBP15.33■□□□□ 0.04
ATG3-202ENST00000402314 SYT2Q8N9I0 419 aaPredicted RBP15.33■□□□□ 0.04
ATG3-202ENST00000402314 SH2D3AQ9BRG2 576 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 TMBIM4Q9HC24 238 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 VAV3Q9UKW4 847 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 RAD17O75943 681 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 SREBF1P36956 1147 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 IFNAR2P48551 515 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 ZNF844Q08AG5 666 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 MKRN4PQ13434 485 aaPredicted RBP15.33■□□□□ 0.04
ATG3-202ENST00000402314 LRCH2Q5VUJ6 765 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 C6orf89Q6UWU4 347 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 ZNF571Q7Z3V5 609 aaPredicted RBP15.33■□□□□ 0.04
ATG3-202ENST00000402314 RBM46Q8TBY0 533 aaKnown RBP15.33■□□□□ 0.04
ATG3-202ENST00000402314 SPAG5Q96R06 1193 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 SELENOSQ9BQE4 189 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 GLIS2Q9BZE0 524 aaPredicted RBP15.33■□□□□ 0.04
ATG3-202ENST00000402314 CCDC113Q9H0I3 377 aa15.33■□□□□ 0.04
ATG3-202ENST00000402314 ZBTB12Q9Y330 459 aaPredicted RBP15.33■□□□□ 0.04
ATG3-202ENST00000402314 SSU72P8A0A1W2PR75 194 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 DDX39AO00148 427 aaKnown RBP15.32■□□□□ 0.04
ATG3-202ENST00000402314 AP3B2Q13367 1082 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 ASIC2Q16515 512 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 SGSM3Q96HU1 749 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 DYDC2Q96IM9 177 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 SIPA1L1O43166 1804 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 HMGB1P1B2RPK0 211 aaPredicted RBP15.32■□□□□ 0.04
ATG3-202ENST00000402314 H0YIN7 160 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 PJA2O43164 708 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 IFFO1Q0D2I5 559 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 TBC1D10BQ4KMP7 808 aaPredicted RBP15.32■□□□□ 0.04
ATG3-202ENST00000402314 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
ATG3-202ENST00000402314 WRAP73Q9P2S5 460 aaPredicted RBP15.32■□□□□ 0.04
ATG3-202ENST00000402314 KCNG1Q9UIX4 513 aa15.32■□□□□ 0.04
ATG3-202ENST00000402314 C21orf2O43822 256 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 KIF1CO43896 1103 aaKnown RBP15.31■□□□□ 0.04
ATG3-202ENST00000402314 BUB1BO60566 1050 aaPredicted RBP15.31■□□□□ 0.04
ATG3-202ENST00000402314 UCHL3P15374 230 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 SLC18A3Q16572 532 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 ERMNQ8TAM6 284 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 FAXDC2Q96IV6 333 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 ATP8A1Q9Y2Q0 1164 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 RABGAP1Q9Y3P9 1069 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 ASTN1O14525 1302 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 NR3C1P04150 777 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 PON1P27169 355 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 BYSLQ13895 437 aaKnown RBP15.31■□□□□ 0.04
ATG3-202ENST00000402314 RDH13Q8NBN7 331 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 TAF4BQ92750 862 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 IQCDQ96DY2 449 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 MTFR1LQ9H019 292 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.31■□□□□ 0.042e-10■■■■■ 72.1
ATG3-202ENST00000402314 PNMA2Q9UL42 364 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 CD2APQ9Y5K6 639 aa15.31■□□□□ 0.04
ATG3-202ENST00000402314 CTNND1O60716 968 aaKnown RBP15.3■□□□□ 0.04
ATG3-202ENST00000402314 TBCAO75347 108 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms