RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 VSIG10LQ86VR7 867 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SOCS4Q8WXH5 440 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 FGD4Q96M96 766 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ARHGAP39Q9C0H5 1083 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 BMP2KQ9NSY1 1161 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CYP3A7-CYP3A51PA0A087WV96 503 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 LRRIQ3A6PVS8 624 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 EPHB6O15197 1021 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 AKR1B10O60218 316 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 NR3C2P08235 984 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 HOXC6P09630 235 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CYP3A7P24462 503 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 LMAN1P49257 510 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 GYS2P54840 703 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 UBXN2AP68543 259 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 COASYQ13057 564 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MAP2K5Q13163 448 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ZCWPW2Q504Y3 356 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PDXDC1Q6P996 788 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MOXD1Q6UVY6 613 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 RRAGAQ7L523 313 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 KCNK18Q7Z418 384 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ZNF467Q7Z7K2 595 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 BAP1Q92560 729 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 HAS1Q92839 578 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 NUCKS1Q9H1E3 243 aaKnown RBP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SLC5A4Q9NY91 659 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 LRRC53A6NM62 1247 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PDE2AO00408 941 aaPredicted RBP17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PJA2O43164 708 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MARCH6O60337 910 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 FKTNO75072 461 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 N4BP1O75113 896 aaKnown RBP17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ECM2O94769 699 aaPredicted RBP17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 EDNRBP24530 442 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 FKBP3Q00688 224 aaKnown RBP17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MAPK8IP2Q13387 824 aaPredicted RBP17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MMGT1Q8N4V1 131 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 GOLGA5Q8TBA6 731 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ZNF296Q8WUU4 475 aaPredicted RBP17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DNAJC19Q96DA6 116 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CEP63Q96MT8 703 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 COL4A3BPQ9Y5P4 624 aa17.46■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SSU72P8A0A1W2PR75 194 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 GNA14O95837 355 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CAP1Q01518 475 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 FAM26FQ5R3K3 315 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 DOCK3Q8IZD9 2030 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 IL31RAQ8NI17 732 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MORC4Q8TE76 937 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 SYN2Q92777 582 aaPredicted RBP17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MBOAT7Q96N66 472 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MPHOSPH6Q99547 160 aaKnown RBP17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 PANK4Q9NVE7 773 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ZNF185O15231 689 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 GNRH1P01148 92 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 TCP1P17987 556 aaKnown RBP17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 RGS2P41220 211 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 TNNT3P45378 269 aaPredicted RBP17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MRPS9P82933 396 aaKnown RBP17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CACNA2D4Q7Z3S7 1137 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CREG2Q8IUH2 290 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 PCDHA12Q9UN75 941 aa17.45■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ASB14A6NK59 587 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 FAM86B1E9PN63 330 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 STAM2O75886 525 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 FAM86B2P0C5J1 330 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CCND2P30279 289 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MAGEA1P43355 309 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 LRRC41Q15345 812 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 STXBP2Q15833 593 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ECM1Q16610 540 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ZSCAN26Q16670 478 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CEP55Q53EZ4 464 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MAMDC4Q6UXC1 1216 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CCDC65Q8IXS2 484 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CCDC155Q8N6L0 562 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CD99L2Q8TCZ2 262 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 COG1Q8WTW3 980 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MAML3Q96JK9 1138 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CWC15Q9P013 229 aaKnown RBP17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CEP72Q9P209 647 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 HPCAL4Q9UM19 191 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 HYOU1Q9Y4L1 999 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CAPN6Q9Y6Q1 641 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 PLXNA1Q9UIW2 1896 aa17.44■□□□□ 0.38
CHRFAM7A-203ENST00000401522 MYCLP12524 364 aaPredicted RBP17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 XRCC5P13010 732 aaKnown RBP17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ACTN2P35609 894 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ZNF76P36508 570 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 ASTE1Q2TB18 679 aaPredicted RBP17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 Q4G0T1 1027 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CCDC40Q4G0X9 1142 aa17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 CCNI2Q6ZMN8 369 aaPredicted RBP17.43■□□□□ 0.38
CHRFAM7A-203ENST00000401522 RNF10Q8N5U6 811 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms