RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 CRBNQ96SW2 442 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 MAP7D2Q96T17 732 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 TACO1Q9BSH4 297 aaKnown RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 PI4K2AQ9BTU6 479 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 TTLL2Q9BWV7 592 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 VPS37BQ9H9H4 285 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 UBN1Q9NPG3 1134 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 COG5Q9UP83 839 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 DNM3Q9UQ16 869 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 GIT1Q9Y2X7 761 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 TMEM98Q9Y2Y6 226 aa4.34□□□□□ -1.72
CLHC1-201ENST00000401408 SUPT16HQ9Y5B9 1047 aaKnown RBP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.34□□□□□ -1.72
CLHC1-201ENST00000401408 CD163L1Q9NR16 1453 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 A6NNZ2 444 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 H0YHG0 523 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 M0R2N6 131 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TPP1O14773 563 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 ZBTB14O43829 449 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PQBP1O60828 265 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 ZBED4O75132 1171 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 MT-CO1P00395 513 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PAHP00439 452 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 MYBP10242 640 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 ARAFP10398 606 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 COL9A1P20849 921 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 LORP23490 312 aaPredicted RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 GRIK1P39086 918 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 IARSP41252 1262 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CRKP46108 304 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 YARSP54577 528 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 DCAF7P61962 342 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CYP4A11Q02928 519 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TNFAIP2Q03169 654 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CENPCQ03188 943 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PCBP1Q15365 356 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 DHCR24Q15392 516 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC38Q502W7 563 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CAVIN4Q5BKX8 364 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 KAZNQ674X7 775 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 SHQ1Q6PI26 577 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 KCNV1Q6PIU1 500 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CHST15Q7LFX5 561 aaPredicted RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PPP1R42Q7Z4L9 355 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 LRRC49Q8IUZ0 686 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 ZBTB38Q8NAP3 1195 aaPredicted RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 HPS3Q969F9 1004 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 NKD1Q969G9 470 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 FUBP3Q96I24 572 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 RBM14Q96PK6 669 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TBCBQ99426 244 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TTC1Q99614 292 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 SLF1Q9BQI6 1058 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 MMTAG2Q9BU76 263 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 SPATA9Q9BWV2 254 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 MCOLN1Q9GZU1 580 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 SIL1Q9H173 461 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 VPS11Q9H270 941 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TRIT1Q9H3H1 467 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 ITM2CQ9NQX7 267 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 C1orf112Q9NSG2 853 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TCP11L1Q9NUJ3 509 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PSD3Q9NYI0 1048 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 GGA3Q9NZ52 723 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PIM2Q9P1W9 311 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC39Q9UFE4 941 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PTPN22Q9Y2R2 807 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PCDHGC5Q9Y5F6 944 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 MUC3AQ02505 3323 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TRPM7Q96QT4 1865 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 KIF2AO00139 706 aaPredicted RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PLD2O14939 933 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 ADCY3O60266 1144 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 GOSR1O95249 250 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 STAMBPO95630 424 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CAPNS1P04632 268 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 ATP4AP20648 1035 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 ID4P47928 161 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CENPAP49450 140 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CLCN2P51788 898 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 BTKQ06187 659 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC173Q0VFZ6 552 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 SP140Q13342 867 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PPP1R7Q15435 360 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 FNDC3BQ53EP0 1204 aaKnown RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 KRTCAP3Q53RY4 240 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 LIN54Q6MZP7 749 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 C6orf15Q6UXA7 325 aaPredicted RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PACS1Q6VY07 963 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TRIM74Q86UV6 250 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TRIM73Q86UV7 250 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC65Q8IXS2 484 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 TNIP2Q8NFZ5 429 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 OR52K2Q8NGK3 314 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 EDEM1Q92611 657 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 SYTL4Q96C24 671 aaPredicted RBP4.33□□□□□ -1.72
CLHC1-201ENST00000401408 PIGSQ96S52 555 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 CCDC68Q9H2F9 335 aa4.33□□□□□ -1.72
CLHC1-201ENST00000401408 XAB2Q9HCS7 855 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms