RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 SH3RF1Q7Z6J0 888 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 TPH2Q8IWU9 490 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 SYMPKQ92797 1274 aaKnown RBP8.36□□□□□ -1.07
USP16-204ENST00000399976 C7orf25Q9BPX7 421 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 XPNPEP1Q9NQW7 623 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 OLFML3Q9NRN5 406 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 DDX19AQ9NUU7 478 aaKnown RBP8.36□□□□□ -1.07
USP16-204ENST00000399976 RGL1Q9NZL6 768 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 ATP11BQ9Y2G3 1177 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 PHKA2P46019 1235 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 RAB27AP51159 221 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 POLGP54098 1239 aaPredicted RBP8.36□□□□□ -1.07
USP16-204ENST00000399976 MCCD1P59942 119 aaPredicted RBP8.36□□□□□ -1.07
USP16-204ENST00000399976 ENPEPQ07075 957 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 NAALADL2Q58DX5 795 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 FBXO47Q5MNV8 452 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 RINT1Q6NUQ1 792 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 EFCAB12Q6NXP0 572 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 CKAP2LQ8IYA6 745 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 CNNM3Q8NE01 707 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 MRPS27Q92552 414 aaKnown RBP8.36□□□□□ -1.07
USP16-204ENST00000399976 SLC9A7Q96T83 725 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 TRPV6Q9H1D0 765 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 TRMT13Q9NUP7 481 aaKnown RBP8.36□□□□□ -1.07
USP16-204ENST00000399976 CGNQ9P2M7 1197 aaKnown RBP8.36□□□□□ -1.07
USP16-204ENST00000399976 NOD1Q9Y239 953 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 ANK1P16157 1881 aa8.36□□□□□ -1.07
USP16-204ENST00000399976 KIAA0100Q14667 2235 aaKnown RBP8.35□□□□□ -1.07
USP16-204ENST00000399976 RSPH10B2B2RC85 870 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 GPR182O15218 404 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 SLFN14P0C7P3 912 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 PLA2G4BP0C869 781 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 RSPH10BP0C881 870 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 NCKAP1LP55160 1127 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 PTENP60484 403 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 EHHADHQ08426 723 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 CTTNQ14247 550 aaKnown RBP8.35□□□□□ -1.07
USP16-204ENST00000399976 DSC3Q14574 896 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 KYAT1Q16773 422 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 XKR9Q5GH70 373 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 PADI6Q6TGC4 694 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 APBB1IPQ7Z5R6 666 aaPredicted RBP8.35□□□□□ -1.07
USP16-204ENST00000399976 VTI1AQ96AJ9 217 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 GCOM2Q9BZD3 368 aaPredicted RBP8.35□□□□□ -1.07
USP16-204ENST00000399976 CCDC113Q9H0I3 377 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 ERVK-5Q9HDB9 667 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 COL4A3BPQ9Y5P4 624 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 PQBP1O60828 265 aaKnown RBP8.35□□□□□ -1.07
USP16-204ENST00000399976 DARSP14868 501 aaKnown RBP8.35□□□□□ -1.07
USP16-204ENST00000399976 RAG1P15918 1043 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 PTGS1P23219 599 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 MAPK7Q13164 816 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 PSMD2Q13200 908 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 RRAGBQ5VZM2 374 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 POTEGQ6S5H5 508 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 RUFY4Q6ZNE9 571 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 C7orf61Q8IZ16 206 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 SEPT8Q92599 483 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 STRA6Q9BX79 667 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 TTC3P53804 2025 aa8.35□□□□□ -1.07
USP16-204ENST00000399976 KIAA0391O15091 583 aaKnown RBP8.34□□□□□ -1.07
USP16-204ENST00000399976 CHRNA1P02708 482 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 PLCG1P19174 1290 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 SFPQP23246 707 aaKnown RBP eCLIP8.34□□□□□ -1.07
USP16-204ENST00000399976 PPP1R2P41236 205 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 FAM189BP81408 668 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 VWCEQ96DN2 955 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 GBP4Q96PP9 640 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 LBHD1Q9BQE6 289 aaPredicted RBP8.34□□□□□ -1.07
USP16-204ENST00000399976 FOXD4L1Q9NU39 408 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 ARHGAP28Q9P2N2 729 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 EIF3DO15371 548 aaKnown RBP eCLIP8.34□□□□□ -1.07
USP16-204ENST00000399976 ZNF623O75123 536 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 PLS3P13797 630 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 ATP2B1P20020 1258 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 EIF4BP23588 611 aaKnown RBP8.34□□□□□ -1.07
USP16-204ENST00000399976 UBE2HP62256 183 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 KCNB1Q14721 858 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 GPNMBQ14956 572 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 LRIT3Q3SXY7 679 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 MTERF2Q49AM1 385 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 FAM47CQ5HY64 1035 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 ZNF618Q5T7W0 954 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 CRIPAKQ8N1N5 446 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 CCDC43Q96MW1 224 aaKnown RBP8.34□□□□□ -1.07
USP16-204ENST00000399976 TSPYL2Q9H2G4 693 aaPredicted RBP8.34□□□□□ -1.07
USP16-204ENST00000399976 FZD8Q9H461 694 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 PRMT7Q9NVM4 692 aaPredicted RBP8.34□□□□□ -1.07
USP16-204ENST00000399976 SUCLA2Q9P2R7 463 aaPredicted RBP8.34□□□□□ -1.07
USP16-204ENST00000399976 CDY2AQ9Y6F7 541 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 TDRD15B5MCY1 1934 aaKnown RBP8.34□□□□□ -1.07
USP16-204ENST00000399976 CNTNAP2Q9UHC6 1331 aa8.34□□□□□ -1.07
USP16-204ENST00000399976 ACTN4O43707 911 aaKnown RBP8.34□□□□□ -1.08
USP16-204ENST00000399976 ME1P48163 572 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 FAM160A1Q05DH4 1040 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 LAMTOR4Q0VGL1 99 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 LPIN1Q14693 890 aa8.34□□□□□ -1.08
USP16-204ENST00000399976 NFIL3Q16649 462 aa8.34□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms