RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 SYCP3Q8IZU3 236 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 PRPF38AQ8NAV1 312 aaKnown RBP14.92□□□□□ -0.02
PTPN6-202ENST00000399448 USP38Q8NB14 1042 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 SLC30A5Q8TAD4 765 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 RIN2Q8WYP3 895 aaPredicted RBP14.92□□□□□ -0.02
PTPN6-202ENST00000399448 DNAJC12Q9UKB3 198 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 F8VZ95 297 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 KCNK3O14649 394 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 EVI5O60447 810 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 RPS6KA5O75582 802 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 P4HBP07237 508 aaKnown RBP14.92□□□□□ -0.02
PTPN6-202ENST00000399448 GLI1P08151 1106 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 MAPTP10636 758 aaKnown RBP14.92□□□□□ -0.02
PTPN6-202ENST00000399448 LMNB1P20700 586 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 NPEPPSP55786 919 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 TNNC1P63316 161 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 PADI6Q6TGC4 694 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 SLFN11Q7Z7L1 901 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 DAW1Q8N136 415 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 U2AF1L4Q8WU68 220 aaKnown RBP14.92□□□□□ -0.02
PTPN6-202ENST00000399448 CLEC4DQ8WXI8 215 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 ZBED3Q96IU2 234 aaPredicted RBP14.92□□□□□ -0.02
PTPN6-202ENST00000399448 KRT12Q99456 494 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 KCNH7Q9NS40 1196 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 TMEM59LQ9UK28 342 aa14.92□□□□□ -0.02
PTPN6-202ENST00000399448 DDX39AO00148 427 aaKnown RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 EXOC3O60645 756 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 CLSTN1O94985 981 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 HEXIM1O94992 359 aaKnown RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 CCDC172P0C7W6 258 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 GHRHRQ02643 423 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 ALCAMQ13740 583 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 DRAP1Q14919 205 aaPredicted RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 CBWD6Q4V339 395 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 CBWD3Q5JTY5 395 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 CBWD5Q5RIA9 395 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 NIM1KQ8IY84 436 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 ACTRT1Q8TDG2 376 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 ZNF341Q9BYN7 854 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 INTS2Q9H0H0 1204 aaKnown RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 EPB41L5Q9HCM4 733 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 COL20A1Q9P218 1284 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 DBR1Q9UK59 544 aaKnown RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 COL4A5P29400 1685 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 DHX15O43143 795 aaKnown RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 OPA1O60313 960 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 GUCY2DQ02846 1103 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 PAK2Q13177 524 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 SYCE1Q8N0S2 351 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 LNX1Q8TBB1 728 aaPredicted RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 HOOK2Q96ED9 719 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 CAMKK2Q96RR4 588 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 TMEM206Q9H813 350 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 AGO4Q9HCK5 861 aaKnown RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 CWC15Q9P013 229 aaKnown RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 LARSQ9P2J5 1176 aaKnown RBP14.91□□□□□ -0.02
PTPN6-202ENST00000399448 UBIAD1Q9Y5Z9 338 aa14.91□□□□□ -0.02
PTPN6-202ENST00000399448 NFIBO00712 420 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 WDR46O15213 610 aaKnown RBP14.9□□□□□ -0.02
PTPN6-202ENST00000399448 TRIM49P0CI25 452 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 TRIM49CP0CI26 452 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 RNASE9P60153 205 aaKnown RBP14.9□□□□□ -0.02
PTPN6-202ENST00000399448 MYL7Q01449 175 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 BFSP1Q12934 665 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 TKFCQ3LXA3 575 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 PCNX4Q63HM2 1172 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 DNAAF5Q86Y56 855 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 FBXO41Q8TF61 875 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 SCFD2Q8WU76 684 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 TMEM174Q8WUU8 243 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 LPAR1Q92633 364 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 SH3GL2Q99962 352 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 MAP3K20Q9NYL2 800 aaKnown RBP14.9□□□□□ -0.02
PTPN6-202ENST00000399448 SUCLA2Q9P2R7 463 aaPredicted RBP14.9□□□□□ -0.02
PTPN6-202ENST00000399448 APEX2Q9UBZ4 518 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 STXBP5LQ9Y2K9 1186 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 LOXHD1Q8IVV2 1947 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 PHF20L1A8MW92 1017 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 GOLGA8KD6RF30 607 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 K7ENM7 598 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 WNT10BO00744 389 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 HSF2BPO75031 334 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 KRT13P13646 458 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 KCNA3P22001 575 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 RFX1P22670 979 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 CARSP49589 748 aaKnown RBP14.9□□□□□ -0.02
PTPN6-202ENST00000399448 GALCP54803 685 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 PEX26Q7Z412 305 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 SAMD3Q8N6K7 520 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 TSEN2Q8NCE0 465 aaKnown RBP14.9□□□□□ -0.02
PTPN6-202ENST00000399448 IL31RAQ8NI17 732 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 OLIG1Q8TAK6 271 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 GPR88Q9GZN0 384 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 PKD2L1Q9P0L9 805 aa14.9□□□□□ -0.02
PTPN6-202ENST00000399448 CEP104O60308 925 aa14.89□□□□□ -0.03
PTPN6-202ENST00000399448 LYPLA2O95372 231 aa14.89□□□□□ -0.03
PTPN6-202ENST00000399448 IVLP07476 585 aa14.89□□□□□ -0.03
PTPN6-202ENST00000399448 ZBTB48P10074 688 aaPredicted RBP14.89□□□□□ -0.03
PTPN6-202ENST00000399448 DPEP1P16444 411 aa14.89□□□□□ -0.03
PTPN6-202ENST00000399448 QARSP47897 775 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms