RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 CDR2Q01850 454 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 EXOC3L4Q17RC7 722 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 UBAP2Q5T6F2 1119 aaKnown RBP16■□□□□ 0.15
ITSN1-210ENST00000399353 RBM26Q5T8P6 1007 aaKnown RBP16■□□□□ 0.15
ITSN1-210ENST00000399353 GLYCTKQ8IVS8 523 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 SCG3Q8WXD2 468 aaKnown RBP16■□□□□ 0.15
ITSN1-210ENST00000399353 GJA10Q969M2 543 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 CCDC77Q9BR77 488 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 MMADHCQ9H3L0 296 aaPredicted RBP16■□□□□ 0.15
ITSN1-210ENST00000399353 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 MYH13Q9UKX3 1938 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 LRRN2O75325 713 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 TNFAIP3P21580 790 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 TRAPPC10P48553 1259 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 IL9RQ01113 521 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 MAP7Q14244 749 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 FAM26FQ5R3K3 315 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 TAB3Q8N5C8 712 aaPredicted RBP16■□□□□ 0.15
ITSN1-210ENST00000399353 RDH13Q8NBN7 331 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 LARP4BQ92615 738 aaKnown RBP16■□□□□ 0.15
ITSN1-210ENST00000399353 PREBQ9HCU5 417 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 TMEM131LA2VDJ0 1609 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 FAM196BA6NMK8 535 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 RASA4BC9J798 803 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 RASA4O43374 803 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 DESP17661 470 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 SEL1L2Q5TEA6 688 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 DDX12PQ92771 950 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 ANKRD26Q9UPS8 1709 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 MYMKA6NI61 221 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 TTC36A6NLP5 189 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 GYG2O15488 501 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 PJA2O43164 708 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 BNIP1Q12981 228 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 TBC1D10AQ9BXI6 508 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 KIAA1683Q9H0B3 1180 aa16■□□□□ 0.15
ITSN1-210ENST00000399353 SERPINB3P29508 390 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 ATP5DP30049 168 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 CCNFP41002 786 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 KCNH2Q12809 1159 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 ARHGEF18Q6ZSZ5 1173 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 FAM13CQ8NE31 585 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 ATXN2LQ8WWM7 1075 aaKnown RBP15.99■□□□□ 0.15
ITSN1-210ENST00000399353 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.99■□□□□ 0.153e-6■■■■■ 50.8
ITSN1-210ENST00000399353 CARD9Q9H257 536 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 ZBTB1Q9Y2K1 713 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 HNRNPRO43390 633 aaKnown RBP15.99■□□□□ 0.15
ITSN1-210ENST00000399353 NR2F2P24468 414 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 MMP13P45452 471 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 MCL1Q07820 350 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 TPCN2Q8NHX9 752 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 PCMTD2Q9NV79 361 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 CCDC87Q9NVE4 849 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 A6NHS1 94 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 ZNF571Q7Z3V5 609 aaPredicted RBP15.99■□□□□ 0.15
ITSN1-210ENST00000399353 EXOC3L1Q86VI1 746 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 C9orf72Q96LT7 481 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 C6orf50Q9HD87 102 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 SLCO1B3Q9NPD5 702 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 UBN1Q9NPG3 1134 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 CYP39A1Q9NYL5 469 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 WDR35Q9P2L0 1181 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 ZFP69BQ9UJL9 534 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 MTUS1Q9ULD2 1270 aa15.99■□□□□ 0.15
ITSN1-210ENST00000399353 FAM200BP0CF97 657 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 ZNF76P36508 570 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 PPP1R2P41236 205 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 OVGP1Q12889 678 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 MDH1BQ5I0G3 518 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 C6orf163Q5TEZ5 329 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 GSTA5Q7RTV2 222 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 KBTBD4Q9NVX7 518 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 BSDC1Q9NW68 430 aaPredicted RBP15.98■□□□□ 0.15
ITSN1-210ENST00000399353 NMRK1Q9NWW6 199 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 PCDHA4Q9UN74 947 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 CLIC2O15247 247 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 CA4P22748 312 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 ADCY8P40145 1251 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 STAT1P42224 750 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 GALCP54803 685 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 HGSNATQ68CP4 663 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 CCDC137Q6PK04 289 aaKnown RBP15.98■□□□□ 0.15
ITSN1-210ENST00000399353 ZNF572Q7Z3I7 529 aaPredicted RBP15.98■□□□□ 0.15
ITSN1-210ENST00000399353 C4orf33Q8N1A6 199 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.98■□□□□ 0.15
ITSN1-210ENST00000399353 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 XRN1Q8IZH2 1706 aaKnown RBP15.98■□□□□ 0.15
ITSN1-210ENST00000399353 ANKRD33BA6NCL7 494 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 UNC5CO95185 931 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 PAEPP09466 180 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 ECHS1P30084 290 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 VHLP40337 213 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 NONOQ15233 471 aaKnown RBP eCLIP15.98■□□□□ 0.15
ITSN1-210ENST00000399353 PHLDB2Q86SQ0 1253 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 PNMA1Q8ND90 353 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 JDP2Q8WYK2 163 aa15.98■□□□□ 0.15
ITSN1-210ENST00000399353 SPOCK2Q92563 424 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms