RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 FAM189BP81408 668 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 SSRP1Q08945 709 aaKnown RBP12.55□□□□□ -0.4
SRMP1-201ENST00000398959 TBC1D8BQ0IIM8 1120 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 DSC3Q14574 896 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 HERC4Q5GLZ8 1057 aaPredicted RBP12.55□□□□□ -0.4
SRMP1-201ENST00000398959 PLPP4Q5VZY2 271 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 PDE12Q6L8Q7 609 aaKnown RBP12.55□□□□□ -0.4
SRMP1-201ENST00000398959 LINC01465Q8N7H1 131 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 RNF169Q8NCN4 708 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 SLC5A5Q92911 643 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 ZNF668Q96K58 619 aaPredicted RBP12.55□□□□□ -0.4
SRMP1-201ENST00000398959 RIT2Q99578 217 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 TMEM117Q9H0C3 514 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 UNC45AQ9H3U1 944 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 ENTPD7Q9NQZ7 604 aa12.55□□□□□ -0.4
SRMP1-201ENST00000398959 ZNF862O60290 1169 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 GPC3P51654 580 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 ERVFC1P60507 584 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 UGCGQ16739 394 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 RUFY3Q7L099 469 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 MIER3Q7Z3K6 550 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 LRRC43Q8N309 656 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 TBCKQ8TEA7 893 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 NLRP7Q8WX94 980 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
SRMP1-201ENST00000398959 GJA10Q969M2 543 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 CASD1Q96PB1 797 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 CDCA3Q99618 268 aaPredicted RBP12.54□□□□□ -0.4
SRMP1-201ENST00000398959 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
SRMP1-201ENST00000398959 PUF60Q9UHX1 559 aaKnown RBP12.54□□□□□ -0.4
SRMP1-201ENST00000398959 LZTS1Q9Y250 596 aa12.54□□□□□ -0.4
SRMP1-201ENST00000398959 USP15Q9Y4E8 981 aaPredicted RBP12.54□□□□□ -0.4
SRMP1-201ENST00000398959 CPLX1O14810 134 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 FSCN2O14926 492 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 PPM1AP35813 382 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 EVCP57679 992 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
SRMP1-201ENST00000398959 PLCB3Q01970 1234 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 KRT17Q04695 432 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 DUSP6Q16828 381 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 MTERF2Q49AM1 385 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 Q4G0T1 1027 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 KCNT2Q6UVM3 1135 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 HFE2Q6ZVN8 426 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 MFSD14AQ96MC6 490 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 ZNF558Q96NG5 402 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 TCF25Q9BQ70 676 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 PCDHA4Q9UN74 947 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 CYP46A1Q9Y6A2 500 aa12.53□□□□□ -0.4
SRMP1-201ENST00000398959 C2orf16Q68DN1 1984 aa12.52□□□□□ -0.4
SRMP1-201ENST00000398959 LOC730098B7Z3J9 87 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 EDIL3O43854 480 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 PSMD10O75832 226 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 DEXIO95424 95 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
SRMP1-201ENST00000398959 FGFR4P22455 802 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 PBX3P40426 434 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 DNM2P50570 870 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 TOB2Q14106 344 aaPredicted RBP12.52□□□□□ -0.41
SRMP1-201ENST00000398959 LLGL2Q6P1M3 1020 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 LRRC55Q6ZSA7 311 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 BLIDQ8IZY5 108 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 VN1R2Q8NFZ6 395 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 RDM1Q8NG50 284 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 HELQQ8TDG4 1101 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 EDAQ92838 391 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 RPGRIP1Q96KN7 1286 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 PHF7Q9BWX1 381 aaPredicted RBP12.52□□□□□ -0.41
SRMP1-201ENST00000398959 KCNH6Q9H252 994 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 NGRNQ9NPE2 291 aaKnown RBP12.52□□□□□ -0.41
SRMP1-201ENST00000398959 RNF19AQ9NV58 838 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 DACT1Q9NYF0 836 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 SPG21Q9NZD8 308 aa12.52□□□□□ -0.41
SRMP1-201ENST00000398959 DENND4AQ7Z401 1863 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 A0A0U1RQF3 1178 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 CSDE1O75534 798 aaKnown RBP12.51□□□□□ -0.41
SRMP1-201ENST00000398959 TDP2O95551 362 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 EOMESO95936 686 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 ATF7P17544 494 aaPredicted RBP12.51□□□□□ -0.41
SRMP1-201ENST00000398959 CA8P35219 290 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 TECP42680 631 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 CDC42EP1Q00587 391 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 STK3Q13188 491 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 XKR3Q5GH77 459 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 CLLU1OSQ5K130 101 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 CPLX2Q6PUV4 134 aaKnown RBP12.51□□□□□ -0.41
SRMP1-201ENST00000398959 TMC7Q7Z402 723 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 ZNF274Q96GC6 653 aaPredicted RBP12.51□□□□□ -0.41
SRMP1-201ENST00000398959 LARP6Q9BRS8 491 aaKnown RBP12.51□□□□□ -0.41
SRMP1-201ENST00000398959 MRPL9Q9BYD2 267 aaKnown RBP12.51□□□□□ -0.41
SRMP1-201ENST00000398959 NIFKQ9BYG3 293 aaKnown RBP12.51□□□□□ -0.41
SRMP1-201ENST00000398959 GCOM2Q9BZD3 368 aaPredicted RBP12.51□□□□□ -0.41
SRMP1-201ENST00000398959 ZSWIM6Q9HCJ5 1215 aa12.51□□□□□ -0.41
SRMP1-201ENST00000398959 MTCL1Q9Y4B5 1905 aaKnown RBP12.5□□□□□ -0.41
SRMP1-201ENST00000398959 CYP3A7-CYP3A51PA0A087WV96 503 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 TMEM150BA6NC51 233 aa12.5□□□□□ -0.41
SRMP1-201ENST00000398959 DDX11L8A8MPP1 907 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms