RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 REXO1Q8N1G1 1221 aaKnown RBP13.62□□□□□ -0.23
TFF3-202ENST00000398431 FBXL16Q8N461 479 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 BRF1Q92994 677 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 PHKBQ93100 1093 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 ASIC4Q96FT7 647 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 CEP89Q96ST8 783 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 AGXT2Q9BYV1 514 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 DISC1Q9NRI5 854 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 NAP1L2Q9ULW6 460 aaPredicted RBP13.62□□□□□ -0.23
TFF3-202ENST00000398431 CEP131Q9UPN4 1083 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 MYO10Q9HD67 2058 aa13.62□□□□□ -0.23
TFF3-202ENST00000398431 NID2Q14112 1375 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 A0A0U1RQF3 1178 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 CCDC196A0A1B0GTZ2 297 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 MSH4O15457 936 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 FGFR4P22455 802 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 GNA11P29992 359 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 TECP42680 631 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 GPC3P51654 580 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 TCF15Q12870 199 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 DRP2Q13474 957 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 TARBP2Q15633 366 aaKnown RBP13.61□□□□□ -0.23
TFF3-202ENST00000398431 GJA10Q969M2 543 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 TCF25Q9BQ70 676 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 APOL5Q9BWW9 433 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 NGRNQ9NPE2 291 aaKnown RBP13.61□□□□□ -0.23
TFF3-202ENST00000398431 NRBP2Q9NSY0 501 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 PUF60Q9UHX1 559 aaKnown RBP13.61□□□□□ -0.23
TFF3-202ENST00000398431 CDH22Q9UJ99 828 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 AKT3Q9Y243 479 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 SAMM50Q9Y512 469 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 SNX14Q9Y5W7 946 aa13.61□□□□□ -0.23
TFF3-202ENST00000398431 ZDBF2Q9HCK1 2354 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 HOXA2O43364 376 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 CSDE1O75534 798 aaKnown RBP13.6□□□□□ -0.23
TFF3-202ENST00000398431 OATP04181 439 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 DARSP14868 501 aaKnown RBP13.6□□□□□ -0.23
TFF3-202ENST00000398431 ZSCAN20P17040 1043 aaPredicted RBP13.6□□□□□ -0.23
TFF3-202ENST00000398431 HSPA4P34932 840 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 USP11P51784 963 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 SIGLEC14Q08ET2 396 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 B3GNT9Q6UX72 402 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 SLC39A11Q8N1S5 342 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 FBXL6Q8N531 539 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 MRPL43Q8N983 215 aaKnown RBP13.6□□□□□ -0.23
TFF3-202ENST00000398431 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
TFF3-202ENST00000398431 SLC5A5Q92911 643 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 FAM167AQ96KS9 214 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 ZNF558Q96NG5 402 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 SPG21Q9NZD8 308 aa13.6□□□□□ -0.23
TFF3-202ENST00000398431 IGKV6-21A0A0C4DH24 114 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 C2orf71A6NGG8 1288 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 WDR64B1ANS9 1081 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 CDC45O75419 566 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 PSMD10O75832 226 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 EOMESO95936 686 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 TMOD1P28289 359 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 EVCP57679 992 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 FGD1P98174 961 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 PRKCEQ02156 737 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 LLGL2Q6P1M3 1020 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 TMC7Q7Z402 723 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 LRRC43Q8N309 656 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 CCDC136Q96JN2 1154 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 JAKMIP1Q96N16 626 aaKnown RBP13.59□□□□□ -0.23
TFF3-202ENST00000398431 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 RIT2Q99578 217 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
TFF3-202ENST00000398431 NIFKQ9BYG3 293 aaKnown RBP13.59□□□□□ -0.23
TFF3-202ENST00000398431 UNC45AQ9H3U1 944 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 VPS54Q9P1Q0 977 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 KMT2EQ8IZD2 1858 aa13.59□□□□□ -0.23
TFF3-202ENST00000398431 TMEM150BA6NC51 233 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 NT5C1B-RDH14C9J2C7 533 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 CLASP2O75122 1294 aaKnown RBP13.58□□□□□ -0.24
TFF3-202ENST00000398431 IFNAR1P17181 557 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 HOXB8P17481 243 aaPredicted RBP13.58□□□□□ -0.24
TFF3-202ENST00000398431 RPS6KB1P23443 525 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 PDIA3P30101 505 aaKnown RBP13.58□□□□□ -0.24
TFF3-202ENST00000398431 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
TFF3-202ENST00000398431 KRT17Q04695 432 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 PTPN21Q16825 1174 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 RNF169Q8NCN4 708 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 HELQQ8TDG4 1101 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 ENTPD7Q9NQZ7 604 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 HCFC2Q9Y5Z7 792 aa13.58□□□□□ -0.24
TFF3-202ENST00000398431 M0R2N6 131 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 GAS7O60861 476 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 PDGFBP01127 241 aaPredicted RBP13.57□□□□□ -0.24
TFF3-202ENST00000398431 AVPR2P30518 371 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 SFNP31947 248 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 PPM1AP35813 382 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 PTPN5P54829 565 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 CCT2P78371 535 aaKnown RBP13.57□□□□□ -0.24
TFF3-202ENST00000398431 LRCH2Q5VUJ6 765 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 BLOC1S2Q6QNY1 142 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 TMEM173Q86WV6 379 aaPredicted RBP13.57□□□□□ -0.24
TFF3-202ENST00000398431 SUGP1Q8IWZ8 645 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms