RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CHRNA2Q15822 529 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 SEPT7Q16181 437 aaKnown RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 PAPD7Q5XG87 772 aaKnown RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 CDCA2Q69YH5 1023 aaPredicted RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 LAIR1Q6GTX8 287 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 CNNM4Q6P4Q7 775 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 DDX46Q7L014 1031 aaKnown RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 MTDHQ86UE4 582 aaKnown RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 DDX42Q86XP3 938 aaKnown RBP eCLIP3.86□□□□□ -1.79
CD47-203ENST00000398258 PRIMA1Q86XR5 153 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 GPR135Q8IZ08 494 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 PRPF38AQ8NAV1 312 aaKnown RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 TTLL11Q8NHH1 800 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 BBC3Q96PG8 261 aaPredicted RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 ALG1Q9BT22 464 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 CARD11Q9BXL7 1154 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 SMOC1Q9H4F8 434 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 EPB41L1Q9H4G0 881 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 ARHGAP20Q9P2F6 1191 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 PCDHA8Q9Y5H6 950 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 ALG1L2C9J202 215 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 MASP2O00187 686 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 RAB11FIP3O75154 756 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 GLRX3O76003 335 aaKnown RBP3.85□□□□□ -1.79
CD47-203ENST00000398258 FBXO21O94952 628 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 F2P00734 622 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 SOD2P04179 222 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 GNAT1P11488 350 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 PDE6AP16499 860 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 CDKN1CP49918 316 aaPredicted RBP3.85□□□□□ -1.79
CD47-203ENST00000398258 LACTBP83111 547 aaPredicted RBP3.85□□□□□ -1.79
CD47-203ENST00000398258 CFAP100Q494V2 611 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 CD276Q5ZPR3 534 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 UBE2R2Q712K3 238 aaPredicted RBP3.85□□□□□ -1.79
CD47-203ENST00000398258 LARP4Q71RC2 724 aaKnown RBP eCLIP3.85□□□□□ -1.79
CD47-203ENST00000398258 GAREM2Q75VX8 874 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 C16orf59Q7L2K0 433 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 OTOP1Q7RTM1 612 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 OVCH1Q7RTY7 1134 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 STRA8Q7Z7C7 330 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 DDX53Q86TM3 631 aaKnown RBP3.85□□□□□ -1.79
CD47-203ENST00000398258 TMPRSS6Q8IU80 811 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 PIP4K2CQ8TBX8 421 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 PDGFDQ9GZP0 370 aaPredicted RBP3.85□□□□□ -1.79
CD47-203ENST00000398258 IPPKQ9H8X2 491 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 MCM8Q9UJA3 840 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 PHLDB1Q86UU1 1377 aa3.85□□□□□ -1.79
CD47-203ENST00000398258 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 FAM47E-STBD1D6RA91 191 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 INO80B-WBP1J3KQ70 363 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 TRAF5O00463 557 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 GSTA4O15217 222 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 NKRFO15226 690 aaKnown RBP eCLIP3.84□□□□□ -1.79
CD47-203ENST00000398258 ZEB2O60315 1214 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 BRINP1O60477 761 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 PDGFRBP09619 1106 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 SRGAP2CP0DJJ0 459 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 CPEP16870 476 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 POLD1P28340 1107 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 DSG1Q02413 1049 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 PLEKHG6Q3KR16 790 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 TMEM177Q53S58 311 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 NECAB2Q7Z6G3 386 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 IGSF22Q8N9C0 903 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 SMC1BQ8NDV3 1235 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 PHOSPHO1Q8TCT1 267 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 FBXW5Q969U6 566 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 WNK4Q96J92 1243 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 INO80BQ9C086 356 aaPredicted RBP3.84□□□□□ -1.79
CD47-203ENST00000398258 KIAA1683Q9H0B3 1180 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 AGO3Q9H9G7 860 aaKnown RBP3.84□□□□□ -1.79
CD47-203ENST00000398258 METTL14Q9HCE5 456 aaKnown RBP3.84□□□□□ -1.79
CD47-203ENST00000398258 PLA2G3Q9NZ20 509 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 SAMD15Q9P1V8 674 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 B4GALT6Q9UBX8 382 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 NR2E1Q9Y466 385 aa3.84□□□□□ -1.79
CD47-203ENST00000398258 ZNF839A8K0R7 811 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 ZNF561-AS1K7EIQ3 104 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 KRIT1O00522 736 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 GPR39O43194 453 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 RPS6KA4O75676 772 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 NUDT3O95989 172 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 LMNAP02545 664 aaKnown RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 APPP05067 770 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 FAHP16930 419 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 CNGA1P29973 690 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 NEK4P51957 841 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 EXOSC10Q01780 885 aaKnown RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 RRP1BQ14684 758 aaKnown RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 ARHGAP44Q17R89 818 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 PAN2Q504Q3 1202 aaKnown RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 FAM47CQ5HY64 1035 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 PIK3R6Q5UE93 754 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 MBNL2Q5VZF2 373 aaKnown RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 RNF219Q5W0B1 726 aaPredicted RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 CREB3L3Q68CJ9 461 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 OTOP3Q7RTS5 596 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 VRK3Q8IV63 474 aa3.83□□□□□ -1.8
CD47-203ENST00000398258 ZC3H7AQ8IWR0 971 aaKnown RBP3.83□□□□□ -1.8
CD47-203ENST00000398258 UBR7Q8N806 425 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms