RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SEPT9Q9UHD8 586 aaPredicted RBP28.4■■■□□ 2.14
U2AF1-203ENST00000398137 INSL6Q9Y581 213 aa28.4■■■□□ 2.14
U2AF1-203ENST00000398137 SRPRBQ9Y5M8 271 aaKnown RBP28.4■■■□□ 2.14
U2AF1-203ENST00000398137 COL4A6Q14031 1691 aa28.39■■■□□ 2.14
U2AF1-203ENST00000398137 DKC1O60832 514 aaKnown RBP eCLIP28.39■■■□□ 2.14
U2AF1-203ENST00000398137 STBD1O95210 358 aa28.39■■■□□ 2.14
U2AF1-203ENST00000398137 LONP1P36776 959 aaKnown RBP28.39■■■□□ 2.14
U2AF1-203ENST00000398137 CATSPER3Q86XQ3 398 aa28.39■■■□□ 2.14
U2AF1-203ENST00000398137 APBB2Q92870 758 aa28.39■■■□□ 2.14
U2AF1-203ENST00000398137 POLR3CQ9BUI4 534 aaPredicted RBP28.39■■■□□ 2.14
U2AF1-203ENST00000398137 FAM49AQ9H0Q0 323 aaPredicted RBP28.39■■■□□ 2.14
U2AF1-203ENST00000398137 CSRNP2Q9H175 543 aa28.39■■■□□ 2.14
U2AF1-203ENST00000398137 AGO3Q9H9G7 860 aaKnown RBP28.39■■■□□ 2.14
U2AF1-203ENST00000398137 MTUS1Q9ULD2 1270 aa28.39■■■□□ 2.14
U2AF1-203ENST00000398137 DDX11L8A8MPP1 907 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 MRPS6P82932 125 aaKnown RBP28.38■■■□□ 2.13
U2AF1-203ENST00000398137 XKR3Q5GH77 459 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 TJAP1Q5JTD0 557 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 KRT79Q5XKE5 535 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 POTEGQ6S5H5 508 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 C4orf19Q8IY42 314 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 KCNG4Q8TDN1 519 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 ATXN2LQ8WWM7 1075 aaKnown RBP28.38■■■□□ 2.13
U2AF1-203ENST00000398137 AK8Q96MA6 479 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 TGS1Q96RS0 853 aaKnown RBP28.38■■■□□ 2.13
U2AF1-203ENST00000398137 C17orf80Q9BSJ5 609 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 MMTAG2Q9BU76 263 aaKnown RBP28.38■■■□□ 2.13
U2AF1-203ENST00000398137 NRBP2Q9NSY0 501 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 PCDHA2Q9Y5H9 948 aa28.38■■■□□ 2.13
U2AF1-203ENST00000398137 ZBTB42B2RXF5 422 aa28.37■■■□□ 2.13
U2AF1-203ENST00000398137 PPP6R2O75170 966 aa28.37■■■□□ 2.13
U2AF1-203ENST00000398137 RPA1P27694 616 aa28.37■■■□□ 2.13
U2AF1-203ENST00000398137 SPECC1Q5M775 1068 aa28.37■■■□□ 2.13
U2AF1-203ENST00000398137 PLA2G4FQ68DD2 849 aa28.37■■■□□ 2.13
U2AF1-203ENST00000398137 LEO1Q8WVC0 666 aaPredicted RBP28.37■■■□□ 2.13
U2AF1-203ENST00000398137 TNPO1Q92973 898 aaKnown RBP28.37■■■□□ 2.13
U2AF1-203ENST00000398137 STK24Q9Y6E0 443 aa28.37■■■□□ 2.13
U2AF1-203ENST00000398137 NLRC5Q86WI3 1866 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 UPP2O95045 317 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 TMEM62Q0P6H9 643 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 ZRSR1Q15695 479 aaKnown RBP28.36■■■□□ 2.13
U2AF1-203ENST00000398137 ECM1Q16610 540 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 MTHFD1LQ6UB35 978 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 ANO5Q75V66 913 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 RSPH3Q86UC2 560 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 LINC01599Q8WXQ3 324 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 SPATA32Q96LK8 384 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 ASB2Q96Q27 587 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 SH2D3AQ9BRG2 576 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 RCOR1Q9UKL0 485 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 TTC3P53804 2025 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 EVPLQ92817 2033 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 COL1A2P08123 1366 aa28.36■■■□□ 2.13
U2AF1-203ENST00000398137 A0A087WWV3 80 aa28.35■■■□□ 2.13
U2AF1-203ENST00000398137 ZBTB39O15060 712 aa28.35■■■□□ 2.13
U2AF1-203ENST00000398137 GTPBP6O43824 516 aaPredicted RBP28.35■■■□□ 2.13
U2AF1-203ENST00000398137 LYPLA2O95372 231 aa28.35■■■□□ 2.13
U2AF1-203ENST00000398137 YWHABP31946 246 aaKnown RBP28.35■■■□□ 2.13
U2AF1-203ENST00000398137 ME1P48163 572 aa28.35■■■□□ 2.13
U2AF1-203ENST00000398137 MTERF2Q49AM1 385 aa28.35■■■□□ 2.13
U2AF1-203ENST00000398137 ZNF484Q5JVG2 852 aa28.35■■■□□ 2.13
U2AF1-203ENST00000398137 CABP7Q86V35 215 aa28.35■■■□□ 2.13
U2AF1-203ENST00000398137 ENPP3O14638 875 aa28.34■■■□□ 2.13
U2AF1-203ENST00000398137 TFF2Q03403 129 aa28.34■■■□□ 2.13
U2AF1-203ENST00000398137 TSHZ1Q6ZSZ6 1077 aa28.34■■■□□ 2.13
U2AF1-203ENST00000398137 RTN4RL1Q86UN2 441 aaPredicted RBP28.34■■■□□ 2.13
U2AF1-203ENST00000398137 PIGOQ8TEQ8 1089 aa28.34■■■□□ 2.13
U2AF1-203ENST00000398137 NIFKQ9BYG3 293 aaKnown RBP28.34■■■□□ 2.13
U2AF1-203ENST00000398137 GDPD2Q9HCC8 539 aa28.34■■■□□ 2.13
U2AF1-203ENST00000398137 TTC28Q96AY4 2481 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 SMIM35A0A1B0GVV1 85 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 KLRC1P26715 233 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 CD52P31358 61 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 UBA7P41226 1012 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 NPEPPSP55786 919 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 USP49Q70CQ1 688 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 SYMPKQ92797 1274 aaKnown RBP28.33■■■□□ 2.13
U2AF1-203ENST00000398137 EPSTI1Q96J88 318 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 PLIN2Q99541 437 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 SCAND2PQ9GZW5 306 aaPredicted RBP28.33■■■□□ 2.13
U2AF1-203ENST00000398137 RC3H2Q9HBD1 1191 aaKnown RBP28.33■■■□□ 2.13
U2AF1-203ENST00000398137 DDX19AQ9NUU7 478 aaKnown RBP28.33■■■□□ 2.13
U2AF1-203ENST00000398137 KIAA1024Q9UPX6 916 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 TRPV2Q9Y5S1 764 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 KDM3AQ9Y4C1 1321 aa28.33■■■□□ 2.13
U2AF1-203ENST00000398137 TCHHQ07283 1943 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 CUTAO60888 179 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 LINC00271P0C7V0 271 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 TARBP2Q15633 366 aaKnown RBP28.32■■■□□ 2.12
U2AF1-203ENST00000398137 CRIPAKQ8N1N5 446 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 ZNF579Q8NAF0 562 aaKnown RBP28.32■■■□□ 2.12
U2AF1-203ENST00000398137 CDK5RAP3Q96JB5 506 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 PNMA5Q96PV4 448 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 YME1L1Q96TA2 773 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 CYP26B1Q9NR63 512 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 PCDHA7Q9UN72 937 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 RALGAPA2Q2PPJ7 1873 aa28.32■■■□□ 2.12
U2AF1-203ENST00000398137 C22orf31O95567 290 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 MUTP22033 750 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 MRPS5P82675 430 aaKnown RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms