RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 POTEIP0CG38 1075 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 PLCG2P16885 1265 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 KRT20P35900 424 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 MLLT1Q03111 559 aaPredicted RBP7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 TRIM28Q13263 835 aaKnown RBP7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 MRPL58Q14197 206 aaKnown RBP7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 SLC39A14Q15043 492 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 ERCC6LQ2NKX8 1250 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 C15orf59Q2T9L4 293 aaPredicted RBP7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 NUGGCQ68CJ6 796 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 OTUD7BQ6GQQ9 843 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 CCDC170Q8IYT3 715 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 PPP2R3CQ969Q6 453 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 KATNAL1Q9BW62 490 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 SIRT5Q9NXA8 310 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 LAMB4A4D0S4 1761 aa7.13□□□□□ -1.27
TM9SF4-202ENST00000398022 SYNJ2BP-COX16A0A087WUM0 186 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 DDHD2O94830 711 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 GUCA1CO95843 209 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 PIP4K2AP48426 406 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 DSTNP60981 165 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 KRT83P78385 493 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 DDR1Q08345 913 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 KIF5AQ12840 1032 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 CUL3Q13618 768 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 IL31Q6EBC2 164 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 ARMCX5Q6P1M9 558 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 B4GALNT4Q76KP1 1039 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 NLRP10Q86W26 655 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 RTKN2Q8IZC4 609 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 TTC8Q8TAM2 541 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 ZFAND2BQ8WV99 257 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 MPHOSPH8Q99549 860 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 GORASP1Q9BQQ3 440 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 FAM221BA6H8Z2 402 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 ARHGAP6O43182 974 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 PPP6R2O75170 966 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 CHGBP05060 677 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 FDPSP14324 419 aaKnown RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 MLLT3P42568 568 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 FNTAP49354 379 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 METAP2P50579 478 aaKnown RBP eCLIP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 KIF23Q02241 960 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 OASLQ15646 514 aaKnown RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 MZT2AQ6P582 158 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 POMZP3Q6PJE2 187 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 ATG9AQ7Z3C6 839 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 ZNF467Q7Z7K2 595 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 TBC1D21Q8IYX1 336 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 SYCP3Q8IZU3 236 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 TAB3Q8N5C8 712 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 SYT2Q8N9I0 419 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 CNNM3Q8NE01 707 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 C7orf57Q8NEG2 295 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 GDAP1Q8TB36 358 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 WASF1Q92558 559 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 CNDP1Q96KN2 507 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 TBATAQ96M53 351 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 SLC4A9Q96Q91 983 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 JPH2Q9BR39 696 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 VPS37BQ9H9H4 285 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 KIAA1257Q9ULG3 409 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 ZBTB43O43298 467 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 RNF8O76064 485 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 SNX4O95219 450 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 OLFM2O95897 454 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 PNMA6AP0CW24 399 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 ANXA13P27216 316 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 MARCKSP29966 332 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 KCNQ4P56696 695 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 GBE1Q04446 702 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 TRIM71Q2Q1W2 868 aaKnown RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 TMEM53Q6P2H8 277 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 SDCCAG3Q96C92 435 aa7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 CLK4Q9HAZ1 481 aaKnown RBP7.12□□□□□ -1.27
TM9SF4-202ENST00000398022 MYH15Q9Y2K3 1946 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 EFCAB8A8MWE9 144 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 NCAM2O15394 837 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 MAP3K6O95382 1288 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 KCNA3P22001 575 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 ASMTP46597 345 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 HAAOP46952 286 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 NEK3P51956 506 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 C21orf58P58505 322 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CBX3Q13185 183 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 MTERF2Q49AM1 385 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 FCRLBQ6BAA4 426 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CCDC121Q6ZUS5 278 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 USP51Q70EK9 711 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 IFNL1Q8IU54 200 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 LPIN2Q92539 896 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 SYTL4Q96C24 671 aaPredicted RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 CNDP2Q96KP4 475 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 SAMD11Q96NU1 681 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 NR1H4Q96RI1 486 aaPredicted RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 TUBA1CQ9BQE3 449 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 EIF2AQ9BY44 585 aaKnown RBP7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 BRD9Q9H8M2 597 aa7.11□□□□□ -1.27
TM9SF4-202ENST00000398022 ANGEL1Q9UNK9 670 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms