RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 CDK15Q96Q40 435 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 IL17RBQ9NRM6 502 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 ABI2Q9NYB9 513 aaPredicted RBP4.29□□□□□ -1.72
UBE3A-202ENST00000397954 BTBD7Q9P203 1132 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 MCM8Q9UJA3 840 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 ZNF536O15090 1300 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 PRKAB2O43741 272 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 RANBP6O60518 1105 aaKnown RBP4.29□□□□□ -1.72
UBE3A-202ENST00000397954 RASGRP1O95267 797 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 C1RP00736 705 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 NEDD9Q14511 834 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 TTLL4Q14679 1199 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 DUSP28Q4G0W2 176 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 VPS53Q5VIR6 699 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 LRRC69Q6ZNQ3 347 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 STOX1Q6ZVD7 989 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 CDAN1Q8IWY9 1227 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 LRRC47Q8N1G4 583 aaKnown RBP4.29□□□□□ -1.72
UBE3A-202ENST00000397954 ENAHQ8N8S7 591 aaPredicted RBP4.29□□□□□ -1.72
UBE3A-202ENST00000397954 U2AF1L4Q8WU68 220 aaKnown RBP4.29□□□□□ -1.72
UBE3A-202ENST00000397954 RELTQ969Z4 430 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 SAMD11Q96NU1 681 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 NEK1Q96PY6 1258 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 ZIC5Q96T25 663 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 SH2B1Q9NRF2 756 aaPredicted RBP4.29□□□□□ -1.72
UBE3A-202ENST00000397954 RNF146Q9NTX7 359 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 CYP39A1Q9NYL5 469 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 KCNG1Q9UIX4 513 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 CCPG1Q9ULG6 757 aa4.29□□□□□ -1.72
UBE3A-202ENST00000397954 RBM8AQ9Y5S9 174 aaKnown RBP4.29□□□□□ -1.72
UBE3A-202ENST00000397954 NEDD4P46934 1319 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 UPK3BL1B0FP48 263 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 UPK3BL2E5RIL1 263 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TK2O00142 265 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 SLC27A2O14975 620 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TBX3O15119 743 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 GAS2O43903 313 aaKnown RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 XYLBO75191 536 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ZNF865P0CJ78 1059 aaPredicted RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 GNAT1P11488 350 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 GRIA4P48058 902 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ALDH5A1P51649 535 aaPredicted RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ARSDP51689 593 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TROAPQ12815 778 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 STRN3Q13033 797 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 STXBP2Q15833 593 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 SLC4A8Q2Y0W8 1093 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 YOD1Q5VVQ6 348 aaPredicted RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 PRAMEF18Q5VWM3 479 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 CREB3L3Q68CJ9 461 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 CWC27Q6UX04 472 aaKnown RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 BTLAQ7Z6A9 289 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 NEK9Q8TD19 979 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ACER1Q8TDN7 264 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 IGDCC4Q8TDY8 1250 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 APBB2Q92870 758 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 KCNN1Q92952 543 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ATG4CQ96DT6 458 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TRERF1Q96PN7 1200 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 KATNBL1Q9H079 304 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 AP5M1Q9H0R1 490 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ZNF395Q9H8N7 513 aaPredicted RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 FNDC3AQ9Y2H6 1198 aaKnown RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 KIAA1671Q9BY89 1806 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 FAM221AA4D161 298 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TMEM232C9JQI7 657 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 GCOM1H8Y6P7 765 aaPredicted RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 POLR2MP0CAP2 368 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 CYP2C8P10632 490 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ITKQ08881 620 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 PRKG1Q13976 671 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 HSP90AA2PQ14568 343 aaPredicted RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 LRIT3Q3SXY7 679 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TMEM214Q6NUQ4 689 aaKnown RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 PSRC1Q6PGN9 363 aaPredicted RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 RNF207Q6ZRF8 634 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TMTC3Q6ZXV5 915 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ZNF589Q86UQ0 364 aaPredicted RBP4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TBC1D10CQ8IV04 446 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 FAM178BQ8IXR5 827 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 ANKRD35Q8N283 1001 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 USP38Q8NB14 1042 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 PHOSPHO2Q8TCD6 241 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TRIB2Q92519 343 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 DDX11Q96FC9 970 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 DYNLL2Q96FJ2 89 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 FAM227BQ96M60 508 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 HHIPQ96QV1 700 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TCF12Q99081 682 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 YIPF4Q9BSR8 244 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 CDH19Q9H159 772 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 PRO3102Q9H379 93 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 LY9Q9HBG7 655 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 RIC8AQ9NPQ8 531 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 DZANK1Q9NVP4 752 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TAGLN3Q9UI15 199 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 MAD2L2Q9UI95 211 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 PCDHB10Q9UN67 800 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 SIP14410 1827 aa4.28□□□□□ -1.72
UBE3A-202ENST00000397954 TMEM238LA0A1B0GVL6 79 aa4.28□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms