RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CYP2C9P11712 490 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 NPEPPSP55786 919 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 GRB10Q13322 594 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 LBX2Q6XYB7 198 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 C4orf19Q8IY42 314 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 U2AF1L4Q8WU68 220 aaKnown RBP8.99□□□□□ -0.97
PTPRD-204ENST00000397606 ST7Q9NRC1 585 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 PCDHB4Q9Y5E5 795 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 UBR2Q8IWV8 1755 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 UBE4BO95155 1302 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 NPHP3-ACAD11A0A0J9YXS1 232 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 MED24O75448 989 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 ATP1A3P13637 1013 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 SYCE1Q8N0S2 351 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 ADSSL1Q8N142 457 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 ARRDC4Q8NCT1 418 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 SLC5A5Q92911 643 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 HVCN1Q96D96 273 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 MED10Q9BTT4 135 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 FSD2A1L4K1 749 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 ZBED6P86452 979 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 FAM110CQ1W6H9 321 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 EFCAB12Q6NXP0 572 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 PPP1R2P3Q6NXS1 205 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 SARM1Q6SZW1 724 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 CEP112Q8N8E3 955 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.99□□□□□ -0.97
PTPRD-204ENST00000397606 L3MBTL3Q96JM7 780 aaPredicted RBP8.99□□□□□ -0.97
PTPRD-204ENST00000397606 SNX25Q9H3E2 840 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 AGO2Q9UKV8 859 aaKnown RBP8.99□□□□□ -0.97
PTPRD-204ENST00000397606 HPSEQ9Y251 543 aa8.99□□□□□ -0.97
PTPRD-204ENST00000397606 IGSF9BQ9UPX0 1349 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 UQCRHLA0A096LP55 91 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 UQCRHP07919 91 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 AKR1A1P14550 325 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 COL9A3Q14050 684 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 RINT1Q6NUQ1 792 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 MTERF4Q7Z6M4 381 aaKnown RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 GPIHBP1Q8IV16 184 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 GPD1LQ8N335 351 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 CYP2W1Q8TAV3 490 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 ZNF668Q96K58 619 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 NXF1Q9UBU9 619 aaKnown RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 MTUS1Q9ULD2 1270 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 GSTTP1A0A1W2PQM5 241 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 LGALS16A8MUM7 142 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 EIF3DO15371 548 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 RPLP2P05387 115 aaKnown RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 AP3M2P53677 418 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 SNRPFP62306 86 aaKnown RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 TUBB4BP68371 445 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 IQSEC1Q6DN90 963 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 VSTM4Q8IW00 320 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 UBL4BQ8N7F7 174 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 PRIMPOLQ96LW4 560 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 NAP1L3Q99457 506 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 PPME1Q9Y570 386 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 SIPA1L3O60292 1781 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 C4AP0C0L4 1744 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 BTBD19C9JJ37 291 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 NSFP46459 744 aaKnown RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 VAMP7P51809 220 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 SP3Q02447 781 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 STK4Q13043 487 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 PPP2R5CQ13362 524 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 SEL1L2Q5TEA6 688 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 HOOK3Q86VS8 718 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 RNF34Q969K3 372 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 PPP1R9BQ96SB3 815 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 PRMT7Q9NVM4 692 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 A0A0G2JLL6 359 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 H2AFZP0C0S5 128 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 GPC3P51654 580 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 DGKZQ13574 1117 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 EDRF1Q3B7T1 1238 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 H2AFVQ71UI9 128 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 OTOP1Q7RTM1 612 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 PRRT2Q7Z6L0 340 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 CCDC117Q8IWD4 279 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 BEST2Q8NFU1 509 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 AFG1LQ8WV93 481 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 LRRC45Q96CN5 670 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 SENP7Q9BQF6 1050 aa8.98□□□□□ -0.97
PTPRD-204ENST00000397606 UBE2TQ9NPD8 197 aaPredicted RBP8.98□□□□□ -0.97
PTPRD-204ENST00000397606 PLCB3Q01970 1234 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 KCNH2Q12809 1159 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 ACVR2BQ13705 512 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 HLTFQ14527 1009 aaKnown RBP eCLIP8.97□□□□□ -0.97
PTPRD-204ENST00000397606 ZNF667Q5HYK9 610 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 SYT10Q6XYQ8 523 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 GPR142Q7Z601 462 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 FRMD5Q7Z6J6 570 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 LRRC8AQ8IWT6 810 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 TINF2Q9BSI4 451 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 KBTBD4Q9NVX7 518 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 RBAKQ9NYW8 714 aaPredicted RBP8.97□□□□□ -0.97
PTPRD-204ENST00000397606 RASAL2Q9UJF2 1139 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 CYP3A7-CYP3A51PA0A087WV96 503 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 C17orf102A2RUQ5 167 aa8.97□□□□□ -0.97
PTPRD-204ENST00000397606 SLC16A3O15427 465 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms