RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 NOL4O94818 638 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 CFBP00751 764 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 GLI1P08151 1106 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 GNAT1P11488 350 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 PAFAH1B1P43034 410 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 FXR2P51116 673 aaKnown RBP eCLIP5.45□□□□□ -1.541e-6■■■□□ 18.3
SSR1-202ENST00000397511 MKRN4PQ13434 485 aaPredicted RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 CTTNQ14247 550 aaKnown RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 GNPTABQ3T906 1256 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 LRRC23Q53EV4 343 aaPredicted RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 ZC2HC1CQ53FD0 456 aaPredicted RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 ASPRV1Q53RT3 343 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 C1QTNF12Q5T7M4 302 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 KLHDC7AQ5VTJ3 777 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 HGSNATQ68CP4 663 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 SLFN13Q68D06 897 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 DDX42Q86XP3 938 aaKnown RBP eCLIP5.45□□□□□ -1.54
SSR1-202ENST00000397511 SEPT12Q8IYM1 358 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 CCDC63Q8NA47 563 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 RETREG2Q8NC44 543 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 FAM81AQ8TBF8 368 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 ELMO3Q96BJ8 720 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 SEC16BQ96JE7 1060 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 ATP6V1G3Q96LB4 118 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 RIC8AQ9NPQ8 531 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 LMCD1Q9NZU5 365 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 SPDYE3A6NKU9 549 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 FAM86B1E9PN63 330 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 KCNK3O14649 394 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 GCNT3O95395 438 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 HLA-DOAP06340 250 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 FAM86B2P0C5J1 330 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 ATP4AP20648 1035 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 ABCB4P21439 1286 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 PTK2Q05397 1052 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 HLTFQ14527 1009 aaKnown RBP eCLIP5.45□□□□□ -1.54
SSR1-202ENST00000397511 CERKLQ49MI3 558 aaPredicted RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 ARSHQ5FYA8 562 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 GKAP1Q5VSY0 366 aaPredicted RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 PDXDC1Q6P996 788 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 CCDC174Q6PII3 467 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 SDCCAG8Q86SQ7 713 aaPredicted RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 NCAPG2Q86XI2 1143 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 SFR1Q86XK3 245 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 TPH2Q8IWU9 490 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 CD302Q8IX05 232 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 SLF2Q8IX21 1173 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 RBM12BQ8IXT5 1001 aaKnown RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 PIP4P2Q8N4L2 257 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 TEX9Q8N6V9 391 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 C1orf131Q8NDD1 294 aaKnown RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 ZFAND2BQ8WV99 257 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 CCDC43Q96MW1 224 aaKnown RBP5.45□□□□□ -1.54
SSR1-202ENST00000397511 ZNF570Q96NI8 536 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 NOX5Q96PH1 765 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 ANO3Q9BYT9 981 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 TSGA10Q9BZW7 698 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 TRIM31Q9BZY9 425 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 STK17AQ9UEE5 414 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 ZBTB21Q9ULJ3 1066 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 SUGT1Q9Y2Z0 365 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 NRAPQ86VF7 1730 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 MYH7BA7E2Y1 1941 aa5.45□□□□□ -1.54
SSR1-202ENST00000397511 PVALEFA0A1B0GWK0 134 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 LRRD1A4D1F6 860 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CFAP73A6NFT4 308 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 A6NHS1 94 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 BTAF1O14981 1849 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 DIAPH2O60879 1101 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 BBOX1O75936 387 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 HEXIM1O94992 359 aaKnown RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 CLTAP09496 248 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 LINGO3P0C6S8 592 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 PYGBP11216 843 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CYP11B2P19099 503 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 TNFRSF8P28908 595 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 ABCD1P33897 745 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 COPB2P35606 906 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 ECE1P42892 770 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CTCFP49711 727 aaPredicted RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 BRCA2P51587 3418 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 JAG1P78504 1218 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 LRRC63Q05C16 580 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 ITIH3Q06033 890 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 GABPAQ06546 454 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 PRPF4BQ13523 1007 aaKnown RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 COG2Q14746 738 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 SPRED3Q2MJR0 410 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 APOBEC3HQ6NTF7 200 aaKnown RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 MTHFD1LQ6UB35 978 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 PNMA8AQ86V59 439 aaPredicted RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 SBF2Q86WG5 1849 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CCDC65Q8IXS2 484 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 GALNT15Q8N3T1 639 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 FNBP4Q8N3X1 1017 aaPredicted RBP5.44□□□□□ -1.54
SSR1-202ENST00000397511 PIK3R5Q8WYR1 880 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 CNKSR1Q969H4 720 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 TEKT1Q969V4 418 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 DTNBP1Q96EV8 351 aa5.44□□□□□ -1.54
SSR1-202ENST00000397511 EPAS1Q99814 870 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms