RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MAFO75444 373 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-204ENST00000397443 PRPF6O94906 941 aaKnown RBP23.4■■□□□ 1.34
CPNE1-204ENST00000397443 ERCC5P28715 1186 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-204ENST00000397443 PURAQ00577 322 aaKnown RBP23.4■■□□□ 1.34
CPNE1-204ENST00000397443 MYL5Q02045 173 aa23.4■■□□□ 1.34
CPNE1-204ENST00000397443 GTPBP4Q9BZE4 634 aaKnown RBP23.4■■□□□ 1.34
CPNE1-204ENST00000397443 UPF3AQ9H1J1 476 aaKnown RBP23.4■■□□□ 1.34
CPNE1-204ENST00000397443 OLFML3Q9NRN5 406 aa23.4■■□□□ 1.34
CPNE1-204ENST00000397443 SETD4Q9NVD3 440 aa23.4■■□□□ 1.34
CPNE1-204ENST00000397443 ADAMTS4O75173 837 aa23.39■■□□□ 1.34
CPNE1-204ENST00000397443 PSEN2P49810 448 aa23.39■■□□□ 1.34
CPNE1-204ENST00000397443 DMP1Q13316 513 aaPredicted RBP23.39■■□□□ 1.34
CPNE1-204ENST00000397443 GRIK4Q16099 956 aa23.39■■□□□ 1.34
CPNE1-204ENST00000397443 ZNF484Q5JVG2 852 aa23.39■■□□□ 1.34
CPNE1-204ENST00000397443 SCFD1Q8WVM8 642 aa23.39■■□□□ 1.34
CPNE1-204ENST00000397443 FIZ1Q96SL8 496 aa23.39■■□□□ 1.34
CPNE1-204ENST00000397443 SEL1LQ9UBV2 794 aa23.39■■□□□ 1.34
CPNE1-204ENST00000397443 EVPLQ92817 2033 aa23.39■■□□□ 1.34
CPNE1-204ENST00000397443 DNAH12Q6ZR08 3092 aa23.39■■□□□ 1.33
CPNE1-204ENST00000397443 SLC16A4O15374 487 aa23.39■■□□□ 1.33
CPNE1-204ENST00000397443 HSPA8P11142 646 aaKnown RBP23.39■■□□□ 1.33
CPNE1-204ENST00000397443 MRE11P49959 708 aa23.39■■□□□ 1.33
CPNE1-204ENST00000397443 LBX1P52954 281 aa23.39■■□□□ 1.33
CPNE1-204ENST00000397443 NCAPHQ15003 741 aa23.39■■□□□ 1.33
CPNE1-204ENST00000397443 SLC9C1Q4G0N8 1177 aa23.39■■□□□ 1.33
CPNE1-204ENST00000397443 GUF1Q8N442 669 aaKnown RBP23.39■■□□□ 1.33
CPNE1-204ENST00000397443 SMTNL1A8MU46 457 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 SMIM10L2AP0DMW4 78 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 SMIM10L2BP0DMW5 78 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 KLRC1P26715 233 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 CLCN3P51790 818 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 KCNA1Q09470 495 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 TPD52L1Q16890 204 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-204ENST00000397443 EFCAB12Q6NXP0 572 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 ZNF720Q7Z2F6 126 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 ASAP3Q8TDY4 903 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 EEF2KMTQ96G04 330 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 RWDD2AQ9UIY3 292 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 NFE2L3Q9Y4A8 694 aa23.38■■□□□ 1.33
CPNE1-204ENST00000397443 C22orf31O95567 290 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 NPTX2P47972 431 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 KCNA10Q16322 511 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 P2RX5Q93086 422 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 DHTKD1Q96HY7 919 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-204ENST00000397443 ZNF668Q96K58 619 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-204ENST00000397443 IFT74Q96LB3 600 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 SEMA6BQ9H3T3 888 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 FANCLQ9NW38 375 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 ZEB2O60315 1214 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 GJB1P08034 283 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 MKRN4PQ13434 485 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-204ENST00000397443 ENOX1Q8TC92 643 aaKnown RBP23.37■■□□□ 1.33
CPNE1-204ENST00000397443 UNC93B1Q9H1C4 597 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 IKZF4Q9H2S9 585 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 KMT5AQ9NQR1 393 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 PPME1Q9Y570 386 aa23.37■■□□□ 1.33
CPNE1-204ENST00000397443 IKBKBO14920 756 aa23.36■■□□□ 1.33
CPNE1-204ENST00000397443 ASGR1P07306 291 aa23.36■■□□□ 1.33
CPNE1-204ENST00000397443 HSPA1AP0DMV8 641 aaKnown RBP23.36■■□□□ 1.33
CPNE1-204ENST00000397443 HSPA1BP0DMV9 641 aaKnown RBP23.36■■□□□ 1.33
CPNE1-204ENST00000397443 GLRA2P23416 452 aa23.36■■□□□ 1.33
CPNE1-204ENST00000397443 SMTNP53814 917 aa23.36■■□□□ 1.33
CPNE1-204ENST00000397443 COBLL1Q53SF7 1204 aa23.36■■□□□ 1.33
CPNE1-204ENST00000397443 CT47A1Q5JQC4 288 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-204ENST00000397443 ANKRD40Q6AI12 368 aa23.36■■□□□ 1.33
CPNE1-204ENST00000397443 EPM2AIP1Q7L775 607 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-204ENST00000397443 LMBR1Q8WVP7 490 aa23.36■■□□□ 1.33
CPNE1-204ENST00000397443 PRPF31Q8WWY3 499 aaKnown RBP23.36■■□□□ 1.33
CPNE1-204ENST00000397443 MTG1Q9BT17 334 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-204ENST00000397443 KATNAL1Q9BW62 490 aa23.36■■□□□ 1.33
CPNE1-204ENST00000397443 LRRIQ4A6NIV6 560 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 CCNE1P24864 410 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 ARL2P36404 184 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 MTFR1Q15390 333 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 MTHFD1LQ6UB35 978 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 HAUS6Q7Z4H7 955 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 PPP1R16BQ96T49 567 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.35■■□□□ 1.336e-9■□□□□ 10.4
CPNE1-204ENST00000397443 SAMSN1Q9NSI8 373 aaKnown RBP23.35■■□□□ 1.33
CPNE1-204ENST00000397443 SUCLA2Q9P2R7 463 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-204ENST00000397443 HOXD13P35453 343 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 PPP1R2P41236 205 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 MARCH8Q5T0T0 291 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 RNF180Q86T96 592 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 RHPN2Q8IUC4 686 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 RETREG2Q8NC44 543 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 KLHDC9Q8NEP7 349 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 JPH2Q9BR39 696 aaPredicted RBP23.35■■□□□ 1.33
CPNE1-204ENST00000397443 ADGRA3Q8IWK6 1321 aa23.35■■□□□ 1.33
CPNE1-204ENST00000397443 COL1A2P08123 1366 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 IGKV6-21A0A0C4DH24 114 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 HAS3O00219 553 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 MSCO60682 206 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 KPNA6O60684 536 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 KIF20AO95235 890 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 ZNF200P98182 395 aaPredicted RBP23.34■■□□□ 1.33
CPNE1-204ENST00000397443 SPATA1Q5VX52 437 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 LHX8Q68G74 356 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 CREBRFQ8IUR6 639 aa23.34■■□□□ 1.33
CPNE1-204ENST00000397443 EXOC8Q8IYI6 725 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms