RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SLC9A2Q9UBY0 812 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 PARNO95453 639 aaKnown RBP14.74□□□□□ -0.05
SEC13-209ENST00000397117 GH1P01241 217 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 SPATA31C1P0DKV0 1188 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 CHMP4BP1P59074 171 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 DEFB103AP81534 67 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 ECM1Q16610 540 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 LY6KQ17RY6 165 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 CNKSR3Q6P9H4 555 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 POTEGQ6S5H5 508 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 LRRC8DQ7L1W4 858 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 CYFIP1Q7L576 1253 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 SMAP1Q8IYB5 467 aaPredicted RBP14.74□□□□□ -0.05
SEC13-209ENST00000397117 KCTD17Q8N5Z5 321 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 RDM1Q8NG50 284 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 LARP4BQ92615 738 aaKnown RBP14.74□□□□□ -0.05
SEC13-209ENST00000397117 RAD54LQ92698 747 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 STAMQ92783 540 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 SMARCE1Q969G3 411 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 HSD17B14Q9BPX1 270 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 LRRC27Q9C0I9 530 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 TSPY26PQ9H489 355 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 RGL1Q9NZL6 768 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 DNM3Q9UQ16 869 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 SIP14410 1827 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 GPR37L1O60883 481 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 NBNO60934 754 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 SLITRK3O94933 977 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 MYL1P05976 194 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 P4HBP07237 508 aaKnown RBP14.73□□□□□ -0.05
SEC13-209ENST00000397117 MUTP22033 750 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 UBA1P22314 1058 aaKnown RBP14.73□□□□□ -0.05
SEC13-209ENST00000397117 ERVK-21P61565 698 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 SP2Q02086 613 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 SP4Q02446 784 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 TYRO3Q06418 890 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 CTTNQ14247 550 aaKnown RBP14.73□□□□□ -0.05
SEC13-209ENST00000397117 DHX8Q14562 1220 aaKnown RBP14.73□□□□□ -0.05
SEC13-209ENST00000397117 TMEM31Q5JXX7 168 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 RAD9AQ99638 391 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 SUGCTQ9HAC7 445 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 CD320Q9NPF0 282 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 C11orf16Q9NQ32 467 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 KBTBD4Q9NVX7 518 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 GTF2IRD1Q9UHL9 959 aa14.73□□□□□ -0.05
SEC13-209ENST00000397117 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.72□□□□□ -0.05
SEC13-209ENST00000397117 ABHD14A-ACY1A0A1B0GW23 586 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 SORBS3O60504 671 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 GJB5O95377 273 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 CCNE2O96020 404 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 SSBP05455 408 aaKnown RBP eCLIP14.72□□□□□ -0.05
SEC13-209ENST00000397117 PRR29P0C7W0 189 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 CKBP12277 381 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 TRAF7Q6Q0C0 670 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 BANK1Q8NDB2 785 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 GDPD5Q8WTR4 605 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 LXNQ9BS40 222 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 ZBED2Q9BTP6 218 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 MLXIPQ9HAP2 919 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 BLOC1S4Q9NUP1 217 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 HDAC6Q9UBN7 1215 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 DDX41Q9UJV9 622 aaKnown RBP14.72□□□□□ -0.05
SEC13-209ENST00000397117 PCDHA5Q9Y5H7 936 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 PCDHA10Q9Y5I2 948 aa14.72□□□□□ -0.05
SEC13-209ENST00000397117 FSD2A1L4K1 749 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 E9PMD0 336 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 PI4K2BG5E9Z4 385 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 GGPS1O95749 300 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 PSAPP07602 524 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 PLA2G4BP0C869 781 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 QARSP47897 775 aaKnown RBP14.71□□□□□ -0.05
SEC13-209ENST00000397117 DPYDQ12882 1025 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 MCM6Q14566 821 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 STX1AQ16623 288 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 TRIM71Q2Q1W2 868 aaKnown RBP14.71□□□□□ -0.05
SEC13-209ENST00000397117 MIS18BP1Q6P0N0 1132 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 KCNK18Q7Z418 384 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 LRRC15Q8TF66 581 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 NACC1Q96RE7 527 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 TGS1Q96RS0 853 aaKnown RBP14.71□□□□□ -0.05
SEC13-209ENST00000397117 BLZF1Q9H2G9 400 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 ZSWIM4Q9H7M6 989 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 TUBE1Q9UJT0 475 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 MUC6Q6W4X9 2439 aa14.71□□□□□ -0.05
SEC13-209ENST00000397117 LINC01553A4QN01 128 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 HAS3O00219 553 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 BIN1O00499 593 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 PSEN2P49810 448 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 ACTR2P61160 394 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 CUL4BQ13620 913 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 DGKDQ16760 1214 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 METTL7BQ6UX53 244 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 EMID1Q96A84 441 aaPredicted RBP14.7□□□□□ -0.06
SEC13-209ENST00000397117 MTRQ99707 1265 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 BCAS3Q9H6U6 928 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 BMP2KQ9NSY1 1161 aaPredicted RBP14.7□□□□□ -0.06
SEC13-209ENST00000397117 ANO10Q9NW15 660 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 HCN4Q9Y3Q4 1203 aa14.7□□□□□ -0.06
SEC13-209ENST00000397117 PIEZO1Q92508 2521 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms