RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 IBSPP21815 317 aaPredicted RBP15.14■□□□□ 0.01
NUP98-204ENST00000397004 NMT1P30419 496 aaKnown RBP15.14■□□□□ 0.01
NUP98-204ENST00000397004 MRPL12P52815 198 aaKnown RBP15.14■□□□□ 0.01
NUP98-204ENST00000397004 KRT35Q92764 455 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 GRHL1Q9NZI5 618 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 VAV3Q9UKW4 847 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 TPX2Q9ULW0 747 aaKnown RBP15.14■□□□□ 0.01
NUP98-204ENST00000397004 PCDHA1Q9Y5I3 950 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 A0A0A6YYK5 440 aaPredicted RBP15.14■□□□□ 0.01
NUP98-204ENST00000397004 TCRBV7S2A1N4TA0A589 114 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 ANKRD63C9JTQ0 380 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 PDXKO00764 312 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 GCFC2P16383 781 aaKnown RBP15.14■□□□□ 0.01
NUP98-204ENST00000397004 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
NUP98-204ENST00000397004 TTC27Q6P3X3 843 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 FBXO25Q8TCJ0 367 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 C18orf8Q96DM3 657 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 CXorf56Q9H5V9 222 aa15.14■□□□□ 0.01
NUP98-204ENST00000397004 KRT18P05783 430 aaKnown RBP15.13■□□□□ 0.01
NUP98-204ENST00000397004 GTF2IP78347 998 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 BMT2Q1RMZ1 405 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 PIGOQ8TEQ8 1089 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 SLITRK6Q9H5Y7 841 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
NUP98-204ENST00000397004 SIPA1L1O43166 1804 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 FOXO6A8MYZ6 492 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 CCDC188H7C350 402 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 TP73O15350 636 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 RPA1P27694 616 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 PTENP60484 403 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 ARHGAP4P98171 946 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 NBPF9Q3BBW0 867 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 WRAP73Q9P2S5 460 aaPredicted RBP15.13■□□□□ 0.01
NUP98-204ENST00000397004 SWAP70Q9UH65 585 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 TTC7AQ9ULT0 858 aaPredicted RBP15.13■□□□□ 0.01
NUP98-204ENST00000397004 FLOT1O75955 427 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 PSMD1Q99460 953 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 SERPINB13Q9UIV8 391 aa15.13■□□□□ 0.01
NUP98-204ENST00000397004 GOLGA6L10A6NI86 522 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 KIAA0391O15091 583 aaKnown RBP15.12■□□□□ 0.01
NUP98-204ENST00000397004 VCAM1P19320 739 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 PTGIRP43119 386 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 ODF2Q5BJF6 829 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 MICALCLQ6ZW33 695 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 UHMK1Q8TAS1 419 aaKnown RBP15.12■□□□□ 0.01
NUP98-204ENST00000397004 SEMA4AQ9H3S1 761 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 LTBP1Q14766 1721 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 MSH4O15457 936 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 PPIP5K2O43314 1243 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 TRIM49P0CI25 452 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 TRIM49CP0CI26 452 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 SCNN1DP51172 638 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 JAG1P78504 1218 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 DRAP1Q14919 205 aaPredicted RBP15.12■□□□□ 0.01
NUP98-204ENST00000397004 PLCB4Q15147 1175 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 CRY2Q49AN0 593 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 LACTB2Q53H82 288 aaPredicted RBP15.12■□□□□ 0.01
NUP98-204ENST00000397004 WLSQ5T9L3 541 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 PHLDB3Q6NSJ2 640 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 CCDC91Q7Z6B0 441 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 SLC20A1Q8WUM9 679 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 XPO6Q96QU8 1125 aaKnown RBP15.12■□□□□ 0.01
NUP98-204ENST00000397004 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.12■□□□□ 0.01
NUP98-204ENST00000397004 MCM8Q9UJA3 840 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 TRPC5Q9UL62 973 aaPredicted RBP15.12■□□□□ 0.01
NUP98-204ENST00000397004 SNX24Q9Y343 169 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 FRMPD4Q14CM0 1322 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 SPDYE3A6NKU9 549 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 CHN1P15882 459 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 HOXA7P31268 230 aaPredicted RBP15.12■□□□□ 0.01
NUP98-204ENST00000397004 FMO2Q99518 471 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 TYW1Q9NV66 732 aaKnown RBP15.12■□□□□ 0.01
NUP98-204ENST00000397004 NCANO14594 1321 aa15.12■□□□□ 0.01
NUP98-204ENST00000397004 GCNT3O95395 438 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 MAP2K2P36507 400 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 CACNB3P54284 484 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
NUP98-204ENST00000397004 BANK1Q8NDB2 785 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 LMO3Q8TAP4 145 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 ERP44Q9BS26 406 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 SOX5P35711 763 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 NPEPPSP55786 919 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 SLC29A2Q14542 456 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 MEX3CQ5U5Q3 659 aaKnown RBP15.11■□□□□ 0.01
NUP98-204ENST00000397004 RUFY4Q6ZNE9 571 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 CCDC121Q6ZUS5 278 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 CCDC114Q96M63 670 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 CRAMP1Q96RY5 1269 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 PLCG2P16885 1265 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 HOXA13P31271 388 aaPredicted RBP15.11■□□□□ 0.01
NUP98-204ENST00000397004 RINT1Q6NUQ1 792 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 SEPT12Q8IYM1 358 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 ARFGAP2Q8N6H7 521 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 PRELID2Q8N945 189 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 FAM129AQ9BZQ8 928 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 ACP6Q9NPH0 428 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 CHUKO15111 745 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 CREB1P16220 341 aa15.11■□□□□ 0.01
NUP98-204ENST00000397004 MMP13P45452 471 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms