RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SFI1A8K8P3 1242 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 POTECB2RU33 542 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 DNAJC8O75937 253 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 ALDH5A1P51649 535 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 LACTB2Q53H82 288 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 TLDC1Q6P9B6 456 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 POTEBQ6S5H4 581 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 TRIM59Q8IWR1 403 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 CCDC65Q8IXS2 484 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 LRRC47Q8N1G4 583 aaKnown RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 NEK9Q8TD19 979 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 EDEM3Q9BZQ6 932 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 AJAP1Q9UKB5 411 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 EME2A4GXA9 379 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 C5orf60A6NFR6 353 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 TCP11X1B4DZS4 312 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 CREB1P16220 341 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 PLCG2P16885 1265 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 KCNA3P22001 575 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 CASP5P51878 434 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 ARHGAP44Q17R89 818 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 C12orf60Q5U649 245 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 NUGGCQ68CJ6 796 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 GALNT17Q6IS24 598 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 VPS36Q86VN1 386 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 LMBR1Q8WVP7 490 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 EYA3Q99504 573 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 CNOT10Q9H9A5 744 aaKnown RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 PCDHA12Q9UN75 941 aa10.66□□□□□ -0.7
TRIM39-203ENST00000396547 COL1A1P02452 1464 aaPredicted RBP10.66□□□□□ -0.7
TRIM39-203ENST00000396547 PALM3A6NDB9 673 aaPredicted RBP10.65□□□□□ -0.7
TRIM39-203ENST00000396547 CCDC188H7C350 402 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 UBE4AQ14139 1066 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 PARP10Q53GL7 1025 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 ERICH1Q86X53 443 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 LRRC57Q8N9N7 239 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 SCFD1Q8WVM8 642 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 C18orf8Q96DM3 657 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 GANQ9H2C0 597 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 AIPL1Q9NZN9 384 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 C15orf41Q9Y2V0 281 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 MYH7BA7E2Y1 1941 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 PPP1R12AO14974 1030 aaPredicted RBP10.65□□□□□ -0.7
TRIM39-203ENST00000396547 ACSL3O95573 720 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 PLA2G4BP0C869 781 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 SLC16A2P36021 539 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 KCNJ1P48048 391 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 CASP4P49662 377 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 PABPC4Q13310 644 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRIM39-203ENST00000396547 LONRF1Q17RB8 773 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 C1orf131Q8NDD1 294 aaKnown RBP10.65□□□□□ -0.7
TRIM39-203ENST00000396547 SLC35G2Q8TBE7 412 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 DNAJC19Q96DA6 116 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 ZBTB10Q96DT7 871 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 SRP68Q9UHB9 627 aaKnown RBP10.65□□□□□ -0.7
TRIM39-203ENST00000396547 TBK1Q9UHD2 729 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 TRPC6Q9Y210 931 aa10.65□□□□□ -0.7
TRIM39-203ENST00000396547 DUOX1Q9NRD9 1551 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 CCDC169A6NNP5 214 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 EVI5O60447 810 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 PON1P27169 355 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 ADCY7P51828 1080 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 SARNPP82979 210 aaKnown RBP10.65□□□□□ -0.71
TRIM39-203ENST00000396547 TNIP1Q15025 636 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 GRIK5Q16478 980 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 STYK1Q6J9G0 422 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 SEPT14Q6ZU15 432 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 BZW1Q7L1Q6 419 aaKnown RBP10.65□□□□□ -0.71
TRIM39-203ENST00000396547 ARMC9Q7Z3E5 817 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 NT5DC3Q86UY8 548 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 RDH13Q8NBN7 331 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 DAGLBQ8NCG7 672 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 SYN2Q92777 582 aaPredicted RBP10.65□□□□□ -0.71
TRIM39-203ENST00000396547 ZNF317Q96PQ6 595 aaPredicted RBP10.65□□□□□ -0.71
TRIM39-203ENST00000396547 RAB17Q9H0T7 212 aa10.65□□□□□ -0.71
TRIM39-203ENST00000396547 NOP53Q9NZM5 478 aaKnown RBP10.65□□□□□ -0.71
TRIM39-203ENST00000396547 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.71
TRIM39-203ENST00000396547 DDX25Q9UHL0 483 aaKnown RBP10.65□□□□□ -0.71
TRIM39-203ENST00000396547 GOLGA6L10A0A0M3HER8 536 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 POTEFA5A3E0 1075 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 DDX3XO00571 662 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRIM39-203ENST00000396547 KRT16P08779 473 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 POTEIP0CG38 1075 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 XRCC5P13010 732 aaKnown RBP10.64□□□□□ -0.71
TRIM39-203ENST00000396547 NQO1P15559 274 aaKnown RBP10.64□□□□□ -0.71
TRIM39-203ENST00000396547 CAPRIN2Q6IMN6 1127 aaKnown RBP10.64□□□□□ -0.71
TRIM39-203ENST00000396547 POTEGQ6S5H5 508 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 POTEEQ6S8J3 1075 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 MTMR9Q96QG7 549 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 GCNT4Q9P109 453 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.64□□□□□ -0.71
TRIM39-203ENST00000396547 LTBP3Q9NS15 1303 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 RASGRF2O14827 1237 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 GRIN3BO60391 1043 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 LRRN2O75325 713 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 AFPP02771 609 aaKnown RBP10.64□□□□□ -0.71
TRIM39-203ENST00000396547 EGFL6Q8IUX8 553 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 CEP95Q96GE4 821 aa10.64□□□□□ -0.71
TRIM39-203ENST00000396547 ERP44Q9BS26 406 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms