RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ZCWPW2Q504Y3 356 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 TMX4Q9H1E5 349 aaPredicted RBP10.12□□□□□ -0.79
NDE1-201ENST00000396354 NEUROG2Q9H2A3 272 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 MAGEF1Q9HAY2 307 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 LUC7LQ9NQ29 371 aaKnown RBP10.12□□□□□ -0.79
NDE1-201ENST00000396354 HOMER2Q9NSB8 354 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 FBXO28Q9NVF7 368 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 PRR12Q9ULL5 1215 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 RBAK-RBAKDNI3L0D1 243 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 EML1O00423 815 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 SART1O43290 800 aaKnown RBP10.12□□□□□ -0.79
NDE1-201ENST00000396354 FGGP02679 453 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 SPATA31C1P0DKV0 1188 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 UCHL3P15374 230 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 HOXD13P35453 343 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 CORO7P57737 925 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 ORC2Q13416 577 aaPredicted RBP10.12□□□□□ -0.79
NDE1-201ENST00000396354 SYDE2Q5VT97 1194 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 CEP57Q86XR8 500 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 GMCL1P1Q8NEA9 526 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 RUSC1Q9BVN2 902 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 CEP72Q9P209 647 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
NDE1-201ENST00000396354 FOXO6A8MYZ6 492 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 AARSP49588 968 aaKnown RBP eCLIP10.11□□□□□ -0.79
NDE1-201ENST00000396354 SLC18A3Q16572 532 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 C2CD6Q53TS8 623 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 SYCP3Q8IZU3 236 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 GMCL1Q96IK5 515 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 WDR18Q9BV38 432 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 ZNF70Q9UC06 446 aaPredicted RBP10.11□□□□□ -0.79
NDE1-201ENST00000396354 FBXL5Q9UKA1 691 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 DNM3Q9UQ16 869 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 NOC2LQ9Y3T9 749 aaKnown RBP10.11□□□□□ -0.79
NDE1-201ENST00000396354 TMEM150BA6NC51 233 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 PHF20L1A8MW92 1017 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 LSP1P33241 339 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 GJC1P36383 396 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 PLTPP55058 493 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 TUBB4BP68371 445 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 ACTN3Q08043 901 aaPredicted RBP10.11□□□□□ -0.79
NDE1-201ENST00000396354 RSBN1LQ6PCB5 846 aaPredicted RBP10.11□□□□□ -0.79
NDE1-201ENST00000396354 OTUD6AQ7L8S5 288 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 PALB2Q86YC2 1186 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 MMGT1Q8N4V1 131 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 RBM46Q8TBY0 533 aaKnown RBP10.11□□□□□ -0.79
NDE1-201ENST00000396354 FAM118BQ9BPY3 351 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 VIPAS39Q9H9C1 493 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 PGAP2Q9UHJ9 254 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 ASTN2O75129 1339 aaPredicted RBP10.11□□□□□ -0.79
NDE1-201ENST00000396354 CYP3A7-CYP3A51PA0A087WV96 503 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 MSH4O15457 936 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 BMP3P12645 472 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 CYP3A7P24462 503 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 SLC12A3P55017 1021 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 COBLL1Q53SF7 1204 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 HYIQ5T013 277 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 NSMFQ6X4W1 530 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 METTL13Q8N6R0 699 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 MRRFQ96E11 262 aaKnown RBP10.11□□□□□ -0.79
NDE1-201ENST00000396354 BTBD6Q96KE9 485 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 SCLT1Q96NL6 688 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
NDE1-201ENST00000396354 PIM2Q9P1W9 311 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 VAV3Q9UKW4 847 aa10.11□□□□□ -0.79
NDE1-201ENST00000396354 GOLGA6L7A0A1B0GV03 622 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 PVALEFA0A1B0GWK0 134 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 FRMD3A2A2Y4 597 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 GOLGA8IPA6NC78 632 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 GOLGA8JA6NMD2 632 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 GCOM1H8Y6P7 765 aaPredicted RBP10.1□□□□□ -0.79
NDE1-201ENST00000396354 ENTPD3O75355 529 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 FAM13AO94988 1023 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 MYZAPP0CAP1 466 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 TNNC1P63316 161 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 FAM182AQ5T1J6 154 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 FBXO11Q86XK2 927 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 CPNE8Q86YQ8 564 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 HOOK2Q96ED9 719 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 JPH2Q9BR39 696 aaPredicted RBP10.1□□□□□ -0.79
NDE1-201ENST00000396354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.1□□□□□ -0.79
NDE1-201ENST00000396354 TAS2R14Q9NYV8 317 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 SNX24Q9Y343 169 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 GRIN2DO15399 1336 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 IGLV3-22A0A075B6J6 115 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 GOLGA8KD6RF30 607 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 PSEN1P49768 467 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 MAGOHP61326 146 aaKnown RBP10.1□□□□□ -0.79
NDE1-201ENST00000396354 TGFB2P61812 414 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 TRIP13Q15645 432 aaPredicted RBP10.1□□□□□ -0.79
NDE1-201ENST00000396354 NAB2Q15742 525 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 UBAP2Q5T6F2 1119 aaKnown RBP10.1□□□□□ -0.79
NDE1-201ENST00000396354 RBM26Q5T8P6 1007 aaKnown RBP10.1□□□□□ -0.79
NDE1-201ENST00000396354 CC2D2BQ6DHV5 1058 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 EMBQ6PCB8 327 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 MAGOHBQ96A72 148 aaKnown RBP10.1□□□□□ -0.79
NDE1-201ENST00000396354 AMNQ9BXJ7 453 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 VEZTQ9HBM0 779 aa10.1□□□□□ -0.79
NDE1-201ENST00000396354 WRAP73Q9P2S5 460 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms