RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MX1P20591 662 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 POLGP54098 1239 aaPredicted RBP15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 STARD6P59095 220 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 GIT2Q14161 759 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 ACAP1Q15027 740 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 ODR4Q5SWX8 454 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 ZNF598Q86UK7 904 aaKnown RBP15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 HOMER1Q86YM7 354 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 VPS52Q8N1B4 723 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 CMASQ8NFW8 434 aaPredicted RBP15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 NXPE3Q969Y0 559 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 CDHR1Q96JP9 859 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 VN1R3Q9BXE9 311 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 FOXQ1Q9C009 403 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 SLC2A4RGQ9NR83 387 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 UBIAD1Q9Y5Z9 338 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 EVPLQ92817 2033 aa15.71■□□□□ 0.11
VCPKMT-201ENST00000395859 MIA3Q5JRA6 1907 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 NBEAQ8NFP9 2946 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 ZBTB42B2RXF5 422 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 NT5C1B-RDH14C9J2C7 533 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 GPR32O75388 356 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 CLCN4P51793 760 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 BCAR1P56945 870 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 PPM1JQ5JR12 505 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 USP17L6PQ6QN14 398 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 DDX53Q86TM3 631 aaKnown RBP15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 ECHDC2Q86YB7 292 aa15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 DDX23Q9BUQ8 820 aaKnown RBP15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 WDR6Q9NNW5 1121 aaKnown RBP15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 SMG5Q9UPR3 1016 aaKnown RBP15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 SMG1Q96Q15 3661 aaKnown RBP15.7■□□□□ 0.1
VCPKMT-201ENST00000395859 SLC30A4O14863 429 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 LILRB3O75022 631 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 KLRC1P26715 233 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 METAP2P50579 478 aaKnown RBP eCLIP15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 CRYBB1P53674 252 aaPredicted RBP15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 GRM4Q14833 912 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 NONOQ15233 471 aaKnown RBP eCLIP15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 PTPN14Q15678 1187 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 PPFIBP1Q86W92 1011 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 BCL7CQ8WUZ0 217 aaPredicted RBP15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 CHAMP1Q96JM3 812 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 MYADMQ96S97 322 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 GINS2Q9Y248 185 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 COL4A3Q01955 1670 aa15.69■□□□□ 0.1
VCPKMT-201ENST00000395859 DSPP15924 2871 aaKnown RBP15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 IGKV6D-21A0A0A0MT36 114 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 ANHXE9PGG2 379 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 ZNF213O14771 459 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 ATG7O95352 703 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 NMIQ13287 307 aaPredicted RBP15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 DCLRE1AQ6PJP8 1040 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 TMEM169Q96HH4 297 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 IGSF21Q96ID5 467 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 OSMRQ99650 979 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 JPH1Q9HDC5 661 aaPredicted RBP15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 IGF2RP11717 2491 aa15.68■□□□□ 0.1
VCPKMT-201ENST00000395859 MAFGO15525 162 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 RFX1P22670 979 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 PMLP29590 882 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 ALDH7A1P49419 539 aaKnown RBP15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 STAT5BP51692 787 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 SHC2P98077 582 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 COL9A3Q14050 684 aaPredicted RBP15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 BMS1Q14692 1282 aaKnown RBP15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 KIZQ2M2Z5 673 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 IFIT1BQ5T764 474 aaKnown RBP15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 KLHL5Q96PQ7 755 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 AZI2Q9H6S1 392 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 JADE2Q9NQC1 790 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 ZSCAN32Q9NX65 697 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 SLC9A2Q9UBY0 812 aa15.67■□□□□ 0.1
VCPKMT-201ENST00000395859 A0A0U1RQF3 1178 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 ACTR2P61160 394 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 MTMR1Q13613 665 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 HTR4Q13639 388 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 CYP26C1Q6V0L0 522 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 ABI1Q8IZP0 508 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 NETO1Q8TDF5 533 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 HELQQ8TDG4 1101 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 COL26A1Q96A83 441 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 PKD2L1Q9P0L9 805 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 USP18Q9UMW8 372 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 DMXL2Q8TDJ6 3036 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 CLUHO75153 1309 aa15.66■□□□□ 0.1
VCPKMT-201ENST00000395859 GCN1Q92616 2671 aaKnown RBP15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 COL1A2P08123 1366 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 TBC1D4O60343 1298 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 CNPP09543 421 aaKnown RBP15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 CA8P35219 290 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 SLC26A2P50443 739 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 C20orf194Q5TEA3 1177 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 SMARCC2Q8TAQ2 1214 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 ATRIPQ8WXE1 791 aa15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 SECISBP2LQ93073 1101 aaKnown RBP15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 MRPL9Q9BYD2 267 aaKnown RBP15.65■□□□□ 0.1
VCPKMT-201ENST00000395859 OSBPL6Q9BZF3 934 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms