RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ARHGAP1Q07960 439 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 RBL2Q08999 1139 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 PCSK7Q16549 785 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 TMEM67Q5HYA8 995 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 TMEM63BQ5T3F8 832 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 KCNV1Q6PIU1 500 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 CASC1Q6TDU7 716 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 CATIPQ7Z7H3 387 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 VSIG10LQ86VR7 867 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 SGMS1Q86VZ5 419 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 ZNF654Q8IZM8 581 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 TTC16Q8NEE8 873 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 OR6J1Q8NGC5 347 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 RNPC3Q96LT9 517 aaKnown RBP7.08□□□□□ -1.28
PTPN20-208ENST00000395727 TAAR1Q96RJ0 339 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 MTG1Q9BT17 334 aaPredicted RBP7.08□□□□□ -1.28
PTPN20-208ENST00000395727 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
PTPN20-208ENST00000395727 ALDH8A1Q9H2A2 487 aaPredicted RBP7.08□□□□□ -1.28
PTPN20-208ENST00000395727 HIPK3Q9H422 1215 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 IGFLR1Q9H665 355 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 IL23AQ9NPF7 189 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 NAGPAQ9UK23 515 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 PCDHA1Q9Y5I3 950 aa7.08□□□□□ -1.28
PTPN20-208ENST00000395727 DDX49Q9Y6V7 483 aaKnown RBP7.08□□□□□ -1.28
PTPN20-208ENST00000395727 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 FAM181BA6NEQ2 426 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 GCOM1H8Y6P7 765 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 SH2B2O14492 632 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 EPB41L2O43491 1005 aaKnown RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 TNFRSF21O75509 655 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 ARIH2O95376 493 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 F2P00734 622 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 CFBP00751 764 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 MMP3P08254 477 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 POLR2MP0CAP2 368 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 CSF2RAP15509 400 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 RFC2P35250 354 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 DGKGP49619 791 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 TBC1D8BQ0IIM8 1120 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 PGM5Q15124 567 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 TMEM240Q5SV17 173 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 TTC39BQ5VTQ0 682 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 ARHGEF16Q5VV41 709 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 CREB3L3Q68CJ9 461 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 KANK3Q6NY19 840 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 XRRA1Q6P2D8 792 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 C20orf204Q6ZNR8 217 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 SND1Q7KZF4 910 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 C16orf59Q7L2K0 433 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 PPTC7Q8NI37 304 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 CTCFLQ8NI51 663 aaPredicted RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 HERVK_113Q902F9 699 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 TBC1D5Q92609 795 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 PIGSQ96S52 555 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 MTIF3Q9H2K0 278 aaKnown RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 CNTN3Q9P232 1028 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 DDX41Q9UJV9 622 aaKnown RBP7.07□□□□□ -1.28
PTPN20-208ENST00000395727 DCTN4Q9UJW0 460 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 NID2Q14112 1375 aa7.07□□□□□ -1.28
PTPN20-208ENST00000395727 SZT2Q5T011 3432 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 hCG_1984214I3L0E3 225 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 HAS3O00219 553 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 PRC1O43663 620 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 CDC45O75419 566 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
PTPN20-208ENST00000395727 EIF2AK2P19525 551 aaKnown RBP7.06□□□□□ -1.28
PTPN20-208ENST00000395727 CASTP20810 708 aaKnown RBP7.06□□□□□ -1.28
PTPN20-208ENST00000395727 PTGS1P23219 599 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 CCND2P30279 289 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 ICAM3P32942 547 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 PSMC6P62333 389 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 SNRPNP63162 240 aaKnown RBP7.06□□□□□ -1.28
PTPN20-208ENST00000395727 GNPTABQ3T906 1256 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 Q7L0L9 218 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 RPUSD2Q8IZ73 545 aaKnown RBP7.06□□□□□ -1.28
PTPN20-208ENST00000395727 FBXL16Q8N461 479 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 ZNF713Q8N859 430 aaPredicted RBP7.06□□□□□ -1.28
PTPN20-208ENST00000395727 C1orf127Q8N9H9 656 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 RRP36Q96EU6 259 aaKnown RBP7.06□□□□□ -1.28
PTPN20-208ENST00000395727 GUCD1Q96NT3 240 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 INPP4AQ96PE3 977 aaPredicted RBP7.06□□□□□ -1.28
PTPN20-208ENST00000395727 KATNAL1Q9BW62 490 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 TRPV6Q9H1D0 765 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 WNT8AQ9H1J5 351 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 CHRDQ9H2X0 955 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 VAT1LQ9HCJ6 419 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 MRVI1Q9Y6F6 885 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 LAMA3Q16787 3333 aa7.06□□□□□ -1.28
PTPN20-208ENST00000395727 CCDC69A6NI79 296 aa7.05□□□□□ -1.28
PTPN20-208ENST00000395727 MEIS2O14770 477 aa7.05□□□□□ -1.28
PTPN20-208ENST00000395727 PPFIA4O75335 1185 aa7.05□□□□□ -1.28
PTPN20-208ENST00000395727 KIF4AO95239 1232 aa7.05□□□□□ -1.28
PTPN20-208ENST00000395727 ALBP02768 609 aa7.05□□□□□ -1.28
PTPN20-208ENST00000395727 MYL3P08590 195 aa7.05□□□□□ -1.28
PTPN20-208ENST00000395727 HMGB1P09429 215 aaKnown RBP7.05□□□□□ -1.28
PTPN20-208ENST00000395727 AMPD1P23109 780 aa7.05□□□□□ -1.28
PTPN20-208ENST00000395727 HOXC8P31273 242 aa7.05□□□□□ -1.28
PTPN20-208ENST00000395727 CYP2C18P33260 490 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms