RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 UBE2ZQ9H832 354 aaPredicted RBP25.8■■□□□ 1.72
PMS2P3-201ENST00000394921 PCDHB7Q9Y5E2 793 aa25.8■■□□□ 1.72
PMS2P3-201ENST00000394921 BDP1A6H8Y1 2624 aa25.8■■□□□ 1.72
PMS2P3-201ENST00000394921 WNT7AO00755 349 aa25.79■■□□□ 1.72
PMS2P3-201ENST00000394921 DARSP14868 501 aaKnown RBP25.79■■□□□ 1.72
PMS2P3-201ENST00000394921 EPHA7Q15375 998 aa25.79■■□□□ 1.72
PMS2P3-201ENST00000394921 TCEAL5Q5H9L2 206 aa25.79■■□□□ 1.72
PMS2P3-201ENST00000394921 NECAB3Q96P71 396 aaPredicted RBP25.79■■□□□ 1.72
PMS2P3-201ENST00000394921 PLVAPQ9BX97 442 aa25.79■■□□□ 1.72
PMS2P3-201ENST00000394921 TNFRSF10AO00220 468 aa25.78■■□□□ 1.72
PMS2P3-201ENST00000394921 MAFO75444 373 aaPredicted RBP25.78■■□□□ 1.72
PMS2P3-201ENST00000394921 P4HBP07237 508 aaKnown RBP25.78■■□□□ 1.72
PMS2P3-201ENST00000394921 FAM102BQ5T8I3 360 aa25.78■■□□□ 1.72
PMS2P3-201ENST00000394921 CCDC83Q8IWF9 413 aa25.78■■□□□ 1.72
PMS2P3-201ENST00000394921 LMAN2LQ9H0V9 348 aa25.78■■□□□ 1.72
PMS2P3-201ENST00000394921 MARCH6O60337 910 aa25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 NPEPPSP55786 919 aa25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 SLFN12Q8IYM2 578 aa25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 ZNF579Q8NAF0 562 aaKnown RBP25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 P2RX5Q93086 422 aa25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 NSUN3Q9H649 340 aaKnown RBP25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 ELAC1Q9H777 363 aaKnown RBP25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 CYP26B1Q9NR63 512 aa25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 TMEM161AQ9NX61 479 aa25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 RGL1Q9NZL6 768 aa25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 PLAGL2Q9UPG8 496 aa25.77■■□□□ 1.72
PMS2P3-201ENST00000394921 FGFR4P22455 802 aa25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 CAMK1Q14012 370 aa25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 TRIM29Q14134 588 aa25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 COL19A1Q14993 1142 aa25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 NCAPH2Q6IBW4 605 aa25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 NLRP7Q8WX94 980 aa25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 LXNQ9BS40 222 aa25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 ALG13Q9NP73 1137 aaKnown RBP25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 RNF19AQ9NV58 838 aa25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 RNF216Q9NWF9 866 aaPredicted RBP25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 SUCLA2Q9P2R7 463 aaPredicted RBP25.76■■□□□ 1.71
PMS2P3-201ENST00000394921 DKC1O60832 514 aaKnown RBP eCLIP25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 CSDE1O75534 798 aaKnown RBP25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 BAG4O95429 457 aaKnown RBP25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 ITGB1P05556 798 aa25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 FGFR1P11362 822 aa25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 NAALADL2Q58DX5 795 aa25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 C4orf19Q8IY42 314 aa25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 DYDC2Q96IM9 177 aa25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 SCLT1Q96NL6 688 aa25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 ATP6V0A4Q9HBG4 840 aa25.75■■□□□ 1.71
PMS2P3-201ENST00000394921 ARID2Q68CP9 1835 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 A0A087WZ62 844 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 TBKBP1A7MCY6 615 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 DNAJB1P25685 340 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 DNM2P50570 870 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 CDC42EP1Q00587 391 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 GUCY1B3Q02153 619 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 KLHL23Q8NBE8 558 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 SPPL3Q8TCT6 385 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 FDXACB1Q9BRP7 624 aaPredicted RBP25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 LLPHQ9BRT6 129 aaKnown RBP25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 GCOM2Q9BZD3 368 aaPredicted RBP25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 HCSTQ9UBK5 93 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 PLXNA4Q9HCM2 1894 aa25.74■■□□□ 1.71
PMS2P3-201ENST00000394921 ZSCAN20P17040 1043 aaPredicted RBP25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 KCNA5P22460 613 aa25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 CTTNQ14247 550 aaKnown RBP25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 CALCRLQ16602 461 aa25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 LEXMQ3ZCV2 418 aa25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 ECHDC2Q86YB7 292 aa25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 KSR1Q8IVT5 923 aa25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 ZSCAN31Q96LW9 406 aaPredicted RBP25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 JPH2Q9BR39 696 aaPredicted RBP25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 DHX33Q9H6R0 707 aaKnown RBP25.73■■□□□ 1.71
PMS2P3-201ENST00000394921 RBM25P49756 843 aaKnown RBP25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 CYP4A11Q02928 519 aa25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 ZNF410Q86VK4 478 aa25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 RHPN2Q8IUC4 686 aa25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 PABPC5Q96DU9 382 aaKnown RBP25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 CEP170P1Q96L14 293 aa25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 MTMR9Q96QG7 549 aa25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 ZSWIM4Q9H7M6 989 aa25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 PPME1Q9Y570 386 aa25.72■■□□□ 1.71
PMS2P3-201ENST00000394921 ZBTB39O15060 712 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 NEMFO60524 1076 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 SLITRK3O94933 977 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 YWHABP31946 246 aaKnown RBP25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 ZNF598Q86UK7 904 aaKnown RBP25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 NEK9Q8TD19 979 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 C8orf76Q96K31 380 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 EIF2AK1Q9BQI3 630 aaKnown RBP25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 TMEM117Q9H0C3 514 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 TMEM60Q9H2L4 133 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 CWH43Q9H720 699 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 SH2B1Q9NRF2 756 aaPredicted RBP25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 TYW1Q9NV66 732 aaKnown RBP25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 PCDHA12Q9UN75 941 aa25.71■■□□□ 1.71
PMS2P3-201ENST00000394921 ATF7P17544 494 aaPredicted RBP25.7■■□□□ 1.71
PMS2P3-201ENST00000394921 HYAL1Q12794 435 aa25.7■■□□□ 1.71
PMS2P3-201ENST00000394921 SLC7A3Q8WY07 619 aa25.7■■□□□ 1.71
PMS2P3-201ENST00000394921 CASD1Q96PB1 797 aa25.7■■□□□ 1.71
PMS2P3-201ENST00000394921 HSD17B14Q9BPX1 270 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms