RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 TAS2R14Q9NYV8 317 aa15.16■□□□□ 0.02
GAPVD1-205ENST00000394084 PPP1R12BO60237 982 aaPredicted RBP15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 FMO5P49326 533 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 DHX9Q08211 1270 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 SF3B2Q13435 895 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 ICE2Q659A1 982 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 TMEM179Q6ZVK1 233 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 PALB2Q86YC2 1186 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 CCDC26Q8TAB7 109 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 ARHGEF26Q96DR7 871 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 SLITRK3O94933 977 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 LRCH2Q5VUJ6 765 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 LRIG3Q6UXM1 1119 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 RASGEF1CQ8N431 466 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 OLIG1Q8TAK6 271 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 CTNNBL1Q8WYA6 563 aaPredicted RBP15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 HES6Q96HZ4 224 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 NOVA2Q9UNW9 492 aaKnown RBP15.15■□□□□ 0.02
GAPVD1-205ENST00000394084 KLRG2A4D1S0 409 aaPredicted RBP15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 DCDC2CA8MYV0 355 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 CLSTN1O94985 981 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 GAP43P17677 238 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 MAEAQ7L5Y9 396 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 PARVGQ9HBI0 331 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 OLFML3Q9NRN5 406 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 A0A0A6YYK5 440 aaPredicted RBP15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 A0A1W2PRG0 241 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 H0YHG0 523 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 CIITAP33076 1130 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 IFT88Q13099 833 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 CCDC174Q6PII3 467 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 C1orf186Q6ZWK4 172 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 BANK1Q8NDB2 785 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 SLC30A5Q8TAD4 765 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 HSD17B14Q9BPX1 270 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.14■□□□□ 0.014e-8■■■■■ 65.2
GAPVD1-205ENST00000394084 PRR12Q9ULL5 1215 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 ATP8A1Q9Y2Q0 1164 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 IGLV3-22A0A075B6J6 115 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 RRP1BQ14684 758 aaKnown RBP15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 KRT71Q3SY84 523 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 DCAF12L1Q5VU92 463 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 AADACL2Q6P093 401 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 OTOP1Q7RTM1 612 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 FAM178BQ8IXR5 827 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 STK33Q9BYT3 514 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 THAP2Q9H0W7 228 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 SLITRK6Q9H5Y7 841 aa15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 UTP11Q9Y3A2 253 aaKnown RBP15.14■□□□□ 0.01
GAPVD1-205ENST00000394084 GTPBP10A4D1E9 387 aaKnown RBP15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 LMNB1P20700 586 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 TNFAIP3P21580 790 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 EMC10Q5UCC4 262 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 TMC3Q7Z5M5 1100 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 ARFGAP2Q8N6H7 521 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 RFFLQ8WZ73 363 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 TDRD3Q9H7E2 651 aaKnown RBP15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 TMOD4Q9NZQ9 345 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 CNOT8Q9UFF9 292 aaKnown RBP15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 CHORDC1Q9UHD1 332 aaPredicted RBP15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 UBR3Q6ZT12 1888 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 TMEM110-MUSTN1A8MSY1 372 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 ANXA13P27216 316 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 ODR4Q5SWX8 454 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 TATDN1Q6P1N9 297 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 MMS22LQ6ZRQ5 1243 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 GLG1Q92896 1179 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 TMX4Q9H1E5 349 aaPredicted RBP15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 ERVK-5Q9HDB9 667 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 WRAP73Q9P2S5 460 aaPredicted RBP15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 INTUQ9ULD6 942 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 FRMD4BQ9Y2L6 1034 aa15.13■□□□□ 0.01
GAPVD1-205ENST00000394084 DDX39AO00148 427 aaKnown RBP15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 DDX3YO15523 660 aaKnown RBP15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 ECE1P42892 770 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 GTF2A1P52655 376 aaPredicted RBP15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 SEPT12Q8IYM1 358 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 SYCP3Q8IZU3 236 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 EIF1ADQ8N9N8 165 aaKnown RBP15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 ZNF622Q969S3 477 aaKnown RBP eCLIP15.12■□□□□ 0.013e-9■□□□□ 9
GAPVD1-205ENST00000394084 HOOK2Q96ED9 719 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 GMCL1Q96IK5 515 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 GPR88Q9GZN0 384 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 GOPCQ9HD26 462 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 AGPAT3Q9NRZ7 376 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 PKD2L1Q9P0L9 805 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 UBAP1LF5GYI3 381 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 EXOC3O60645 756 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 TMEM253P0C7T8 217 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 MMP14P50281 582 aa15.12■□□□□ 0.01
GAPVD1-205ENST00000394084 MAGOHP61326 146 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms