RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 BMP2KQ9NSY1 1161 aaPredicted RBP11.95□□□□□ -0.5
PDGFD-202ENST00000393158 SAMM50Q9Y512 469 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 GRIN2DO15399 1336 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 GJB1P08034 283 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 MAPTP10636 758 aaKnown RBP11.95□□□□□ -0.5
PDGFD-202ENST00000393158 GLRA2P23416 452 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 CCND3P30281 292 aaPredicted RBP11.95□□□□□ -0.5
PDGFD-202ENST00000393158 NFIL3Q16649 462 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 PPP1R13LQ8WUF5 828 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 EXOC1Q9NV70 894 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 USO1O60763 962 aaKnown RBP11.95□□□□□ -0.5
PDGFD-202ENST00000393158 PLS3P13797 630 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 RGS2P41220 211 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 NPTX2P47972 431 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 TCP11X2Q5H9J9 407 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 DNTTIP2Q5QJE6 756 aaKnown RBP11.95□□□□□ -0.5
PDGFD-202ENST00000393158 C1orf220Q5T0J3 134 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 KLHL10Q6JEL2 608 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 CD99L2Q8TCZ2 262 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 ZNF296Q8WUU4 475 aaPredicted RBP11.95□□□□□ -0.5
PDGFD-202ENST00000393158 MRFAP1L1Q96HT8 127 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 IVNS1ABPQ9Y6Y0 642 aa11.95□□□□□ -0.5
PDGFD-202ENST00000393158 CITO14578 2027 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 EIF3DO15371 548 aaKnown RBP eCLIP11.94□□□□□ -0.5
PDGFD-202ENST00000393158 PRPF6O94906 941 aaKnown RBP11.94□□□□□ -0.5
PDGFD-202ENST00000393158 SP3Q02447 781 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 ATP8B4Q8TF62 1192 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 ZNF830Q96NB3 372 aaPredicted RBP11.94□□□□□ -0.5
PDGFD-202ENST00000393158 PARVGQ9HBI0 331 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 TNPO2O14787 897 aaKnown RBP11.94□□□□□ -0.5
PDGFD-202ENST00000393158 CDC25BP30305 580 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 WNT7BP56706 349 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 FANCCQ00597 558 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 ARID5BQ14865 1188 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 KRT31Q15323 416 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 CDCA2Q69YH5 1023 aaPredicted RBP11.94□□□□□ -0.5
PDGFD-202ENST00000393158 RASSF8Q8NHQ8 419 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 PLEKHO2Q8TD55 490 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 GPR25O00155 361 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 LAMC2Q13753 1193 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 HERC4Q5GLZ8 1057 aaPredicted RBP11.94□□□□□ -0.5
PDGFD-202ENST00000393158 ATP6V0A1Q93050 837 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 ZBTB9Q96C00 473 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 IFT122Q9HBG6 1241 aa11.94□□□□□ -0.5
PDGFD-202ENST00000393158 GH1P01241 217 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 ELNP15502 786 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 EMC2Q15006 297 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 LHX8Q68G74 356 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 SCARA3Q6AZY7 606 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 TMEM139Q8IV31 216 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 TTYH3Q9C0H2 523 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 SEPT9Q9UHD8 586 aaPredicted RBP11.93□□□□□ -0.5
PDGFD-202ENST00000393158 MBLAC1A4D2B0 266 aaPredicted RBP11.93□□□□□ -0.5
PDGFD-202ENST00000393158 SSBP05455 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
PDGFD-202ENST00000393158 IDEP14735 1019 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 CAPSQ13938 189 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 MAEAQ7L5Y9 396 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 KLHDC9Q8NEP7 349 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 Q9Y3F1 56 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 DGAT1O75907 488 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 MARK3P27448 753 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 CASP4P49662 377 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 TNFAIP2Q03169 654 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 KNOP1Q1ED39 458 aaKnown RBP11.93□□□□□ -0.5
PDGFD-202ENST00000393158 XKR9Q5GH70 373 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 CEP170P1Q96L14 293 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 MINDY3Q9H8M7 445 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 SRRDQ9UH36 339 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 USP20Q9Y2K6 914 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 PTPRSQ13332 1948 aa11.93□□□□□ -0.5
PDGFD-202ENST00000393158 PPFIA4O75335 1185 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 AKAP3O75969 853 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 FCGRTP55899 365 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 PURAQ00577 322 aaKnown RBP11.92□□□□□ -0.5
PDGFD-202ENST00000393158 AMHR2Q16671 573 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
PDGFD-202ENST00000393158 TRMT1LQ7Z2T5 733 aaKnown RBP11.92□□□□□ -0.5
PDGFD-202ENST00000393158 TLK2Q86UE8 772 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 SPIRE2Q8WWL2 714 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 TMEM143Q96AN5 459 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 THAP9Q9H5L6 903 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 MLXIPQ9HAP2 919 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 IFNKQ9P0W0 207 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 SCN5AQ14524 2016 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 ANKRD63C9JTQ0 380 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 GJA9P57773 515 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 CCDC65Q8IXS2 484 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 MYOCDQ8IZQ8 938 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 WNT8BQ93098 351 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 NAT10Q9H0A0 1025 aaKnown RBP11.92□□□□□ -0.5
PDGFD-202ENST00000393158 SEL1LQ9UBV2 794 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 COL4A3BPQ9Y5P4 624 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 ARHGEF35A5YM69 484 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 MTERF2Q49AM1 385 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 IPO4Q8TEX9 1081 aaKnown RBP11.92□□□□□ -0.5
PDGFD-202ENST00000393158 TIPINQ9BVW5 301 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 LRRC27Q9C0I9 530 aa11.92□□□□□ -0.5
PDGFD-202ENST00000393158 STYXL1Q9Y6J8 313 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms