RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 NWD2Q9ULI1 1742 aa13.91□□□□□ -0.18
ERCC2-204ENST00000391945 TJP1Q07157 1748 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 TBC1D12O60347 775 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 CD58P19256 250 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 DSG3P32926 999 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 SOX10P56693 466 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 SNAPC2Q13487 334 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 ECM1Q16610 540 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 LONRF2Q1L5Z9 754 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 NLRP7Q8WX94 980 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 HSF2BPO75031 334 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 TFDP1Q14186 410 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 MESDQ14696 234 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 DUSP9Q99956 384 aaKnown RBP13.9□□□□□ -0.18
ERCC2-204ENST00000391945 KCNMB3Q9NPA1 279 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 HDAC6Q9UBN7 1215 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 UBR2Q8IWV8 1755 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 CCL15-CCL14A0A0B4J2E2 113 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 CLDN3O15551 220 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 KLRC4O43908 158 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 PEX10O60683 326 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 ACTR2P61160 394 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 TTLL4Q14679 1199 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 DRAP1Q14919 205 aaPredicted RBP13.9□□□□□ -0.18
ERCC2-204ENST00000391945 PGM5Q15124 567 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 CCL15Q16663 113 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 XKR3Q5GH77 459 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 SEL1L2Q5TEA6 688 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 SND1Q7KZF4 910 aaKnown RBP eCLIP13.9□□□□□ -0.18
ERCC2-204ENST00000391945 SESTD1Q86VW0 696 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 P2RX7Q99572 595 aaKnown RBP13.9□□□□□ -0.18
ERCC2-204ENST00000391945 DNAI2Q9GZS0 605 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 PCDHB4Q9Y5E5 795 aa13.9□□□□□ -0.18
ERCC2-204ENST00000391945 TNNC2P02585 160 aa13.9□□□□□ -0.19
ERCC2-204ENST00000391945 GABPB1Q06547 395 aaPredicted RBP13.9□□□□□ -0.19
ERCC2-204ENST00000391945 TMEM119Q4V9L6 283 aa13.9□□□□□ -0.19
ERCC2-204ENST00000391945 ZNF394Q53GI3 561 aa13.9□□□□□ -0.19
ERCC2-204ENST00000391945 ZNF746Q6NUN9 644 aaPredicted RBP13.9□□□□□ -0.19
ERCC2-204ENST00000391945 BTNL9Q6UXG8 535 aa13.9□□□□□ -0.19
ERCC2-204ENST00000391945 FRMD5Q7Z6J6 570 aa13.9□□□□□ -0.19
ERCC2-204ENST00000391945 PSPC1Q8WXF1 523 aaKnown RBP13.9□□□□□ -0.19
ERCC2-204ENST00000391945 RSPH14Q9UHP6 348 aa13.9□□□□□ -0.19
ERCC2-204ENST00000391945 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.19
ERCC2-204ENST00000391945 PLEKP08567 350 aaPredicted RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 PNMA6AP0CW24 399 aaPredicted RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 TCP1P17987 556 aaKnown RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 TUBB4BP68371 445 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 PTK2Q05397 1052 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 EDRF1Q3B7T1 1238 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 LIN9Q5TKA1 542 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 CCDC25Q86WR0 208 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 JPH2Q9BR39 696 aaPredicted RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 DUOX1Q9NRD9 1551 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 IRF6O14896 467 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 DGAT1O75907 488 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 ACOT2P49753 483 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 SCARA5Q6ZMJ2 495 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 GSTA5Q7RTV2 222 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 OPTNQ96CV9 577 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 PDE11AQ9HCR9 933 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 A1CFQ9NQ94 594 aaKnown RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 DDX41Q9UJV9 622 aaKnown RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 CTIFO43310 598 aaKnown RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 CELF2O95319 508 aaKnown RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 PLS3P13797 630 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 KCNA1Q09470 495 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 BRD3Q15059 726 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 MAPK6Q16659 721 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 KIAA1755Q5JYT7 1200 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 RNF149Q8NC42 400 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 CHST13Q8NET6 341 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 AGO4Q9HCK5 861 aaKnown RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 INTS13Q9NVM9 706 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 COL22A1Q8NFW1 1626 aaPredicted RBP13.89□□□□□ -0.19
ERCC2-204ENST00000391945 ITIH6Q6UXX5 1313 aa13.89□□□□□ -0.19
ERCC2-204ENST00000391945 GRIN3BO60391 1043 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 MYCP01106 439 aaPredicted RBP13.88□□□□□ -0.19
ERCC2-204ENST00000391945 PCNX4Q63HM2 1172 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 SIAH1Q8IUQ4 282 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 SYCE1Q8N0S2 351 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 UBL4BQ8N7F7 174 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 SEPT1Q8WYJ6 367 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 CCDC114Q96M63 670 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 HSPBP1Q9NZL4 362 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 ITGB5P18084 799 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 GYS2P54840 703 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 PDXDC1Q6P996 788 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 GJB7Q6PEY0 223 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 REXO1L1PQ8IX06 675 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 LRRC71Q8N4P6 559 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 ZCCHC17Q9NP64 241 aaKnown RBP13.88□□□□□ -0.19
ERCC2-204ENST00000391945 FHOD1Q9Y613 1164 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 TUBBP07437 444 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 MMP14P50281 582 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 GLYCTKQ8IVS8 523 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 BBXQ8WY36 941 aaPredicted RBP13.88□□□□□ -0.19
ERCC2-204ENST00000391945 SPC25Q9HBM1 224 aa13.88□□□□□ -0.19
ERCC2-204ENST00000391945 MTUS1Q9ULD2 1270 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms