RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 KMT5AQ9NQR1 393 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 AMACRQ9UHK6 382 aa17.24■□□□□ 0.35
SHANK1-204ENST00000391814 ADCY3O60266 1144 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 CNBD2Q96M20 576 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 NUP85Q9BW27 656 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 PUS7LQ9H0K6 701 aaKnown RBP17.23■□□□□ 0.35
SHANK1-204ENST00000391814 AURKCQ9UQB9 309 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 H0YCG3 227 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 SERPINB10P48595 397 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 TAF1BQ53T94 588 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-204ENST00000391814 ZNF577Q9BSK1 485 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.23■□□□□ 0.35
SHANK1-204ENST00000391814 PTPRTO14522 1441 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 DYTNA2CJ06 578 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 KPNA7A9QM74 516 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 XPO1O14980 1071 aaKnown RBP17.23■□□□□ 0.35
SHANK1-204ENST00000391814 CCDC22O60826 627 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 CHEK2O96017 543 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 GCP02774 474 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 IRAK1P51617 712 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 SCARA5Q6ZMJ2 495 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 GALNT4Q8N4A0 578 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 CHCHD3Q9NX63 227 aaKnown RBP17.23■□□□□ 0.35
SHANK1-204ENST00000391814 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 SEC24CP53992 1094 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 DDB1Q16531 1140 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 FAM96AQ9H5X1 160 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 SMARCAL1Q9NZC9 954 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 TNRQ92752 1358 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 TTC26A0AVF1 554 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 PDHBP11177 359 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 ARL4AP40617 200 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 PLA2G4AP47712 749 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 ATXN3P54252 364 aaPredicted RBP17.23■□□□□ 0.35
SHANK1-204ENST00000391814 MRPS35P82673 323 aaKnown RBP17.23■□□□□ 0.35
SHANK1-204ENST00000391814 UBE3AQ05086 875 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 OR6B2Q6IFH4 312 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 XPO6Q96QU8 1125 aaKnown RBP17.23■□□□□ 0.35
SHANK1-204ENST00000391814 SUGCTQ9HAC7 445 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 OLFML3Q9NRN5 406 aa17.23■□□□□ 0.35
SHANK1-204ENST00000391814 GNPATO15228 680 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 PJA2O43164 708 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 PRPF3O43395 683 aaKnown RBP17.22■□□□□ 0.35
SHANK1-204ENST00000391814 SKAP2O75563 359 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-204ENST00000391814 PTGISQ16647 500 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 TRAF7Q6Q0C0 670 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 CCNI2Q6ZMN8 369 aaPredicted RBP17.22■□□□□ 0.35
SHANK1-204ENST00000391814 SH3GL2Q99962 352 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 MAGI2Q86UL8 1455 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 FAM187AA6NFU0 413 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 CCT8L1PA6NM43 557 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 MED7O43513 233 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 CNBD1Q8NA66 436 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 C1orf54Q8WWF1 131 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 CYGBQ8WWM9 190 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 ZIM3Q96PE6 472 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 PIGSQ96S52 555 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 CHRNA3P32297 505 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 TMC4Q7Z404 712 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 PPM1NQ8N819 430 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 NAF1Q96HR8 494 aaKnown RBP17.22■□□□□ 0.35
SHANK1-204ENST00000391814 FOXN1O15353 648 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 GPS1Q13098 491 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 UBE2SQ16763 222 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 ZNF518AQ6AHZ1 1483 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 GOLGA8RI6L899 631 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 ALAS1P13196 640 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 PHKA1P46020 1223 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 GPC5P78333 572 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 KRT17Q04695 432 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 MORF4L2Q15014 288 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 ADGBQ8N7X0 1667 aa17.22■□□□□ 0.35
SHANK1-204ENST00000391814 PRKAB2O43741 272 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 AARSP49588 968 aaKnown RBP eCLIP17.21■□□□□ 0.35
SHANK1-204ENST00000391814 UBE3CQ15386 1083 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 PASD1Q8IV76 773 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 AGTP01019 485 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 SOX5P35711 763 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 KRT39Q6A163 491 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 BRIP1Q9BX63 1249 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 ADAM33Q9BZ11 813 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 MRPL11Q9Y3B7 192 aaKnown RBP17.21■□□□□ 0.35
SHANK1-204ENST00000391814 DYNLL1P63167 89 aaKnown RBP17.21■□□□□ 0.35
SHANK1-204ENST00000391814 PRAMEP78395 509 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 ZBTB33Q86T24 672 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 ANKMY2Q8IV38 441 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 HOOK2Q96ED9 719 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 TRIM51Q9BSJ1 452 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 TMEM206Q9H813 350 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
SHANK1-204ENST00000391814 SFI1A8K8P3 1242 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 SNUPNO95149 360 aaKnown RBP17.21■□□□□ 0.35
SHANK1-204ENST00000391814 ZNF507Q8TCN5 953 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 COA7Q96BR5 231 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 SLITRK6Q9H5Y7 841 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 KRT38O76015 456 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 CLEC17AQ6ZS10 378 aa17.21■□□□□ 0.35
SHANK1-204ENST00000391814 CARD9Q9H257 536 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms