RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 DPH5Q9H2P9 285 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 PABPC3Q9H361 631 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 IL17RBQ9NRM6 502 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 FAM114A2Q9NRY5 505 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SPATS2LQ9NUQ6 558 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 FGFR1OP2Q9NVK5 253 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 KANSL3Q9P2N6 904 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 SWAP70Q9UH65 585 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 AMACRQ9UHK6 382 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 LGALS13Q9UHV8 139 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 CNOT7Q9UIV1 285 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 NAGPAQ9UK23 515 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 INTUQ9ULD6 942 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 THRAP3Q9Y2W1 955 aaKnown RBP3.75□□□□□ -1.81
TRAV39-201ENST00000390466 NUMBLQ9Y6R0 609 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 NRXN2Q9P2S2 1712 aa3.75□□□□□ -1.81
TRAV39-201ENST00000390466 KIAA1217Q5T5P2 1943 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 A0A1B0GVG6 124 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 PALM3A6NDB9 673 aaPredicted RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 FAM187AA6NFU0 413 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 GOLGA6L10A6NI86 522 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 E7ENQ6 273 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 KCNK3O14649 394 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 IRS4O14654 1257 aaPredicted RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 RIPK2O43353 540 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 CEP104O60308 925 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 PDE8AO60658 829 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 TCEA3O75764 348 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 FLOT1O75955 427 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 GFPT2O94808 682 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 UPP2O95045 317 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 UNC5CO95185 931 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 LUC7L3O95232 432 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 AFPP02771 609 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 CLTAP09496 248 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 CYP2D6P10635 497 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 PIM1P11309 404 aaPredicted RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 GNAT1P11488 350 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 CETPP11597 493 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 TAC1P20366 129 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 RASA1P20936 1047 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 CALB2P22676 271 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 CTNNA2P26232 953 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 IVDP26440 423 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 FOXN2P32314 431 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 PDE6BP35913 854 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 UBA7P41226 1012 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 MSH2P43246 934 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 RPL21P46778 160 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 NOVP48745 357 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 MARCKSL1P49006 195 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 CTCFP49711 727 aaPredicted RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 PEX5P50542 639 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 NLRP5P59047 1200 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 RNASE9P60153 205 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 COPS2P61201 443 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 POLR2FP61218 127 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 DYNLL1P63167 89 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 OCRLQ01968 901 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 COASYQ13057 564 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 MAPK7Q13164 816 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 GIT2Q14161 759 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 RBBP5Q15291 538 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 EPHA7Q15375 998 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 PDCD2Q16342 344 aaPredicted RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 ASIC2Q16515 512 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 SBK1Q52WX2 424 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 FAM133BQ5BKY9 247 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 ESCO1Q5FWF5 840 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 SPDYAQ5MJ70 313 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 PPP1R15BQ5SWA1 713 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 C10orf76Q5T2E6 689 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 DAB2IPQ5VWQ8 1189 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 NUGGCQ68CJ6 796 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 GALNT17Q6IS24 598 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 TTC27Q6P3X3 843 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 SLC30A9Q6PML9 568 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 DTHD1Q6ZMT9 781 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 EPM2AIP1Q7L775 607 aaPredicted RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 KRT28Q7Z3Y7 464 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 EXOC3L1Q86VI1 746 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 DZIP3Q86Y13 1208 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 DNAAF5Q86Y56 855 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 DNAJC10Q8IXB1 793 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 DHX37Q8IY37 1157 aaKnown RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 KBTBD2Q8IY47 623 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 PRELID2Q8N945 189 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 FAM133AQ8N9E0 248 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 C12orf50Q8NA57 414 aaPredicted RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 CNBD1Q8NA66 436 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 FAM13CQ8NE31 585 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 SUPT20HQ8NEM7 779 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 HELBQ8NG08 1087 aaPredicted RBP3.74□□□□□ -1.81
TRAV39-201ENST00000390466 FBXO25Q8TCJ0 367 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 NEK9Q8TD19 979 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 KCNV2Q8TDN2 545 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 STK32AQ8WU08 396 aa3.74□□□□□ -1.81
TRAV39-201ENST00000390466 UBLCP1Q8WVY7 318 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms