RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 RC3H2Q9HBD1 1191 aaKnown RBP10.01□□□□□ -0.81
TRBV27-201ENST00000390399 RGS18Q9NS28 235 aa10.01□□□□□ -0.81
TRBV27-201ENST00000390399 C1orf112Q9NSG2 853 aa10.01□□□□□ -0.81
TRBV27-201ENST00000390399 BMP2KQ9NSY1 1161 aaPredicted RBP10.01□□□□□ -0.81
TRBV27-201ENST00000390399 SUCLA2Q9P2R7 463 aaPredicted RBP10.01□□□□□ -0.81
TRBV27-201ENST00000390399 MTCH2Q9Y6C9 303 aa10.01□□□□□ -0.81
TRBV27-201ENST00000390399 RALGAPA2Q2PPJ7 1873 aa10.01□□□□□ -0.81
TRBV27-201ENST00000390399 NLRC5Q86WI3 1866 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 A0A087WZ62 844 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 GAS2O43903 313 aaKnown RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 LPXNO60711 386 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 DGKIO75912 1065 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 SLITRK3O94933 977 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 POU3F3P20264 500 aaPredicted RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 CTNNB1P35222 781 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 TECP42680 631 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 CDC42EP1Q00587 391 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 BTG3Q14201 252 aaPredicted RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 NBR1Q14596 966 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 EMC2Q15006 297 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 EPC2Q52LR7 807 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 XKR9Q5GH70 373 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 MCTP1Q6DN14 999 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 SLC24A5Q71RS6 500 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 RHPN2Q8IUC4 686 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 TMEM192Q8IY95 271 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 CRIPAKQ8N1N5 446 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 ZNF579Q8NAF0 562 aaKnown RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 PSPC1Q8WXF1 523 aaKnown RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 ZNF689Q96CS4 500 aaPredicted RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 NLRP4Q96MN2 994 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 CCDC43Q96MW1 224 aaKnown RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 HSD17B14Q9BPX1 270 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 FDXACB1Q9BRP7 624 aaPredicted RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 GCOM2Q9BZD3 368 aaPredicted RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 DHX33Q9H6R0 707 aaKnown RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 SMC3Q9UQE7 1217 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 ZSCAN21Q9Y5A6 473 aaPredicted RBP10□□□□□ -0.81
TRBV27-201ENST00000390399 PCDHB7Q9Y5E2 793 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 GTF3C3Q9Y5Q9 886 aa10□□□□□ -0.81
TRBV27-201ENST00000390399 TTC3P53804 2025 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 C9IYK1 514 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 H3BQV1 296 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 ZBTB39O15060 712 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 LYPLA2O95372 231 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 ZSCAN20P17040 1043 aaPredicted RBP9.99□□□□□ -0.81
TRBV27-201ENST00000390399 FGFR4P22455 802 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 SFPQP23246 707 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRBV27-201ENST00000390399 DSC3Q14574 896 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 SKIV2LQ15477 1246 aaKnown RBP9.99□□□□□ -0.81
TRBV27-201ENST00000390399 PAN2Q504Q3 1202 aaKnown RBP9.99□□□□□ -0.81
TRBV27-201ENST00000390399 ZNF410Q86VK4 478 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 CMTR2Q8IYT2 770 aaKnown RBP9.99□□□□□ -0.81
TRBV27-201ENST00000390399 ERMNQ8TAM6 284 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 TCP11Q8WWU5 503 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 TMEM143Q96AN5 459 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 MTRQ99707 1265 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 TUFT1Q9NNX1 390 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 PRDM6Q9NQX0 595 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 ANKEF1Q9NU02 776 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 TMEM161AQ9NX61 479 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 LMCD1Q9NZU5 365 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 RWDD3Q9Y3V2 267 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 COL4A3BPQ9Y5P4 624 aa9.99□□□□□ -0.81
TRBV27-201ENST00000390399 H3BNC9 293 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 CSDE1O75534 798 aaKnown RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 LINC00271P0C7V0 271 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 GATMP50440 423 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 TOB1P50616 345 aaPredicted RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 GPM6BQ13491 265 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 PTPROQ16827 1216 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 HAUS3Q68CZ6 603 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 KSR1Q8IVT5 923 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 C4orf32Q8N8J7 132 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 PIGOQ8TEQ8 1089 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 PRPF31Q8WWY3 499 aaKnown RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 CLP1Q92989 425 aaKnown RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 C11orf84Q9BUA3 381 aaPredicted RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 POLR3CQ9BUI4 534 aaPredicted RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 INO80BQ9C086 356 aaPredicted RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 ELAC1Q9H777 363 aaKnown RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 ATP6V0A4Q9HBG4 840 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 THEGQ9P2T0 379 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 PCDHB6Q9Y5E3 794 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 MRPL42Q9Y6G3 142 aaKnown RBP9.98□□□□□ -0.81
TRBV27-201ENST00000390399 KIAA1671Q9BY89 1806 aa9.98□□□□□ -0.81
TRBV27-201ENST00000390399 PRUNE2Q8WUY3 3088 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 A0A087WWV3 80 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 TBKBP1A7MCY6 615 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 C5orf67F2Z3F1 127 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 USO1O60763 962 aaKnown RBP9.97□□□□□ -0.81
TRBV27-201ENST00000390399 MED24O75448 989 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 DGAT1O75907 488 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 RB1P06400 928 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 SRGAP2CP0DJJ0 459 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 SPATA31C1P0DKV0 1188 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 FGFR1P11362 822 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 RPA1P27694 616 aa9.97□□□□□ -0.81
TRBV27-201ENST00000390399 BMPR1AP36894 532 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms