RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 CACNB3P54284 484 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 GRM4Q14833 912 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 PTPN21Q16825 1174 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 TRIM67Q6ZTA4 783 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 AIFM3Q96NN9 605 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 MYCP01106 439 aaPredicted RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 ADCY2Q08462 1091 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 DSTYKQ6XUX3 929 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 RBM41Q96IZ5 413 aaKnown RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 TMEM247A6NEH6 219 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 IPO5O00410 1097 aaKnown RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 ORC2Q13416 577 aaPredicted RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 TRIM15Q9C019 465 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 ANGPTL2Q9UKU9 493 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 NR1D1P20393 614 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 GCKP35557 465 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 SOX5P35711 763 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 SLC27A3Q5K4L6 730 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 GOLGA8IPA6NC78 632 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 GOLGA8JA6NMD2 632 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 PTPN12Q05209 780 aaKnown RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 TRMT2AQ8IZ69 625 aaKnown RBP13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 THEM5Q8N1Q8 247 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 CDC26Q8NHZ8 85 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 NARFQ9UHQ1 456 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 TRIP11Q15643 1979 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 CUL4AQ13619 759 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 EMBQ6PCB8 327 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 MROH7-TTC4A0A0A0MT08 1334 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 ZNF568Q3ZCX4 644 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 TMEM270Q6UE05 265 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 XXYLT1Q8NBI6 393 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 MTRQ99707 1265 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 ADAM22Q9P0K1 906 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 PIM2Q9P1W9 311 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 CEP72Q9P209 647 aa13.17□□□□□ -0.3
KCNQ3-201ENST00000388996 ESRRGP62508 458 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 COASYQ13057 564 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 PREX1Q8TCU6 1659 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 TTC3P53804 2025 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 KRT37O76014 449 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 OR6B3Q8NGW1 331 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 OCRLQ01968 901 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 KRT33BQ14525 404 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 PACSIN2Q9UNF0 486 aaPredicted RBP13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 KIAA1755Q5JYT7 1200 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 PASD1Q8IV76 773 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 ENAHQ8N8S7 591 aaPredicted RBP13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 FAF2Q96CS3 445 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 TUBB6Q9BUF5 446 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 ZNF302Q9NR11 478 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 HACD3Q9P035 362 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 MYH2Q9UKX2 1941 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 CA4P22748 312 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 C6orf118Q5T5N4 469 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 CRLF3Q8IUI8 442 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 CYP26B1Q9NR63 512 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 MX2P20592 715 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 TBXAS1P24557 533 aaPredicted RBP13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 SUSD4Q5VX71 490 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 TOGARAM2Q6ZUX3 1019 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 TRAIPQ9BWF2 469 aa13.16□□□□□ -0.3
KCNQ3-201ENST00000388996 KRT76Q01546 638 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 MAPK6Q16659 721 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 SFR1Q86XK3 245 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 FBXL13Q8NEE6 735 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 NSUN6Q8TEA1 469 aaKnown RBP13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 SERPINI1Q99574 410 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 ZBED2Q9BTP6 218 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 MYH13Q9UKX3 1938 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 TTLL4Q14679 1199 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 MAP3K7O43318 606 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 COPB2P35606 906 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 HP1BP3Q5SSJ5 553 aaPredicted RBP13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 C2orf69Q8N8R5 385 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 RAD54LQ92698 747 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 ABCA9Q8IUA7 1624 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 CCDC151A5D8V7 595 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 SMARCA1P28370 1054 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 EEF1B2P24534 225 aaKnown RBP13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 KIAA1586Q9HCI6 787 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 SAYSD1Q9NPB0 183 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 INTUQ9ULD6 942 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 CLDN3O15551 220 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 PALMO75781 387 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 PEX3P56589 373 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 BPIFA3Q9BQP9 254 aa13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.3
KCNQ3-201ENST00000388996 ABCF3Q9NUQ8 709 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms