RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 SESN2P58004 480 aaPredicted RBP4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ADAM8P78325 824 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 SLC25A3Q00325 362 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 TCIRG1Q13488 830 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 Q6ZPA2 131 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 GAREM2Q75VX8 874 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 OTOP1Q7RTM1 612 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ZNF575Q86XF7 245 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ANKRD35Q8N283 1001 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ANKRD53Q8N9V6 530 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 GCDHQ92947 438 aaPredicted RBP4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 MIEF2Q96C03 454 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 RPL10LQ96L21 214 aaKnown RBP4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 BOCQ9BWV1 1114 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 SLC6A15Q9H2J7 730 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 SAE1Q9UBE0 346 aaPredicted RBP4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 DENND2AQ9ULE3 1009 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 DMRT1Q9Y5R6 373 aa4□□□□□ -1.77
RNU6-1040P-201ENST00000383974 KCNQ2O43526 872 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 H2AFYO75367 372 aaKnown RBP3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 PEX11BO96011 259 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 FNTBP49356 437 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 MAN2A2P49641 1150 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 BPIFB4P59827 614 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 SLC6A3Q01959 620 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ELAVL1Q15717 326 aaKnown RBP3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 CC2D1AQ6P1N0 951 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 NKD2Q969F2 451 aaPredicted RBP3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 GFM2Q969S9 779 aaKnown RBP3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 DNAJC7Q99615 494 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 PRRX2Q99811 253 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 MRPL4Q9BYD3 311 aaKnown RBP3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 GPRC5BQ9NZH0 403 aa3.99□□□□□ -1.77
RNU6-1040P-201ENST00000383974 RAMP2O60895 175 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 RPS6KA4O75676 772 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 NPTXRO95502 500 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 GTF2F1P35269 517 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 MECP2P51608 486 aaKnown RBP3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 KIF11P52732 1056 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ANTXR2P58335 489 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ROM1Q03395 351 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 CNGB1Q14028 1251 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 TOB2Q14106 344 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 DGKDQ16760 1214 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 SLFN12LQ6IEE8 588 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 LRP10Q7Z4F1 713 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 DNAJC10Q8IXB1 793 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ULK2Q8IYT8 1036 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 RPUSD2Q8IZ73 545 aaKnown RBP3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ZSWIM2Q8NEG5 633 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ZG16BQ96DA0 208 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 TTPALQ9BTX7 342 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 HIRIP3Q9BW71 556 aaPredicted RBP3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 GPR87Q9BY21 358 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 TRIM39Q9HCM9 518 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 IL23AQ9NPF7 189 aa3.98□□□□□ -1.77
RNU6-1040P-201ENST00000383974 UBA6A0AVT1 1052 aaPredicted RBP3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 UBE2QL1A1L167 161 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 DVL2O14641 736 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 FAM20BO75063 409 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 GLRX3O76003 335 aaKnown RBP3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 RABGGTBP53611 331 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 COL10A1Q03692 680 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 FAM111BQ6SJ93 734 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 ZNF662Q6ZS27 426 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 JMYQ8N9B5 988 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 E2F7Q96AV8 911 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 PGBD4Q96DM1 585 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 DYDC2Q96IM9 177 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 MAML3Q96JK9 1138 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 CRAMP1Q96RY5 1269 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 TCF25Q9BQ70 676 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 NCOA5Q9HCD5 579 aaKnown RBP3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 KCMF1Q9P0J7 381 aa3.97□□□□□ -1.77
RNU6-1040P-201ENST00000383974 KLRG2A4D1S0 409 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 GOLGA8BA8MQT2 603 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 M0R2C6 588 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 TRAF5O00463 557 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 FOXN1O15353 648 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 TOX4O94842 621 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 FSTL1Q12841 308 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 GAGE13Q4V321 117 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 FKBP15Q5T1M5 1219 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PRAMEF9Q5VWM5 478 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 CLEC14AQ86T13 490 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 GSPT2Q8IYD1 628 aaKnown RBP3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 ELOA2Q8IYF1 753 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 MB21D1Q8N884 522 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 CHST14Q8NCH0 376 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 THAP3Q8WTV1 239 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 WDR92Q96MX6 357 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 SRPK1Q96SB4 655 aaKnown RBP3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PCIF1Q9H4Z3 704 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 NRDE2Q9H7Z3 1164 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 POLR3BQ9NW08 1133 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 DNAI1Q9UI46 699 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 RCAN3Q9UKA8 241 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PTCH2Q9Y6C5 1203 aa3.96□□□□□ -1.78
RNU6-1040P-201ENST00000383974 CCDC163A0A0D9SF12 145 aa3.95□□□□□ -1.78
RNU6-1040P-201ENST00000383974 PPFIA2O75334 1257 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms