RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 CEP89Q96ST8 783 aa22.31■■□□□ 1.16
CPNE9-202ENST00000383831 KATNBL1Q9H079 304 aa22.31■■□□□ 1.16
CPNE9-202ENST00000383831 GPBP1L1Q9HC44 474 aaPredicted RBP22.31■■□□□ 1.16
CPNE9-202ENST00000383831 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.31■■□□□ 1.16
CPNE9-202ENST00000383831 SLC15A5A6NIM6 579 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 SLC16A3O15427 465 aaKnown RBP22.3■■□□□ 1.16
CPNE9-202ENST00000383831 LGR5O75473 907 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 NPTX2P47972 431 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 KCNJ6P48051 423 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 CASP4P49662 377 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 DMP1Q13316 513 aaPredicted RBP22.3■■□□□ 1.16
CPNE9-202ENST00000383831 EMC2Q15006 297 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 HS2ST1Q7LGA3 356 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 SYCP3Q8IZU3 236 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 CCDC51Q96ER9 411 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 ACCSQ96QU6 501 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 AZI2Q9H6S1 392 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 TMEM206Q9H813 350 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 SIK3Q9Y2K2 1263 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.3■■□□□ 1.16
CPNE9-202ENST00000383831 TTC26A0AVF1 554 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 CCDC169A6NNP5 214 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 SNAI1O95863 264 aaPredicted RBP22.3■■□□□ 1.16
CPNE9-202ENST00000383831 POLGP54098 1239 aaPredicted RBP22.3■■□□□ 1.16
CPNE9-202ENST00000383831 SLC17A8Q8NDX2 589 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 PCMTD1Q96MG8 357 aaPredicted RBP22.3■■□□□ 1.16
CPNE9-202ENST00000383831 TTYH3Q9C0H2 523 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 POLR3FQ9H1D9 316 aaPredicted RBP22.3■■□□□ 1.16
CPNE9-202ENST00000383831 C17orf75Q9HAS0 396 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 NRBP2Q9NSY0 501 aa22.3■■□□□ 1.16
CPNE9-202ENST00000383831 RBM47A0AV96 593 aaKnown RBP22.29■■□□□ 1.16
CPNE9-202ENST00000383831 USP27XA6NNY8 438 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 KIF3CO14782 793 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 STX10O60499 249 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 RTP1P59025 263 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 TARBP2Q15633 366 aaKnown RBP22.29■■□□□ 1.16
CPNE9-202ENST00000383831 E4F1Q66K89 784 aaPredicted RBP22.29■■□□□ 1.16
CPNE9-202ENST00000383831 TRIM50Q86XT4 487 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 CCDC155Q8N6L0 562 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 TMEM161BQ8NDZ6 487 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 NPLOC4Q8TAT6 608 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 GOLGA5Q8TBA6 731 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 SPIRE2Q8WWL2 714 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 KIFC3Q9BVG8 833 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 DHX33Q9H6R0 707 aaKnown RBP22.29■■□□□ 1.16
CPNE9-202ENST00000383831 ABHD10Q9NUJ1 306 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 DMAC2Q9NW81 257 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 ARMCX3Q9UH62 379 aaPredicted RBP22.29■■□□□ 1.16
CPNE9-202ENST00000383831 CAPN11Q9UMQ6 739 aa22.29■■□□□ 1.16
CPNE9-202ENST00000383831 ARHGAP6O43182 974 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 ECM2O94769 699 aaPredicted RBP22.28■■□□□ 1.16
CPNE9-202ENST00000383831 EPB41P11171 864 aaKnown RBP22.28■■□□□ 1.16
CPNE9-202ENST00000383831 SMTNP53814 917 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 INHBEP58166 350 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 GJC2Q5T442 439 aaPredicted RBP22.28■■□□□ 1.16
CPNE9-202ENST00000383831 CCAR2Q8N163 923 aaKnown RBP22.28■■□□□ 1.16
CPNE9-202ENST00000383831 GLG1Q92896 1179 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 NUP58Q9BVL2 599 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 KMT5AQ9NQR1 393 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 KCND1Q9NSA2 647 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 FAM184BQ9ULE4 1060 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 ABT1Q9ULW3 272 aaKnown RBP22.28■■□□□ 1.16
CPNE9-202ENST00000383831 EMSYQ7Z589 1322 aa22.28■■□□□ 1.16
CPNE9-202ENST00000383831 TRIM21P19474 475 aaKnown RBP22.27■■□□□ 1.16
CPNE9-202ENST00000383831 KRT9P35527 623 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 ARHGAP1Q07960 439 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 C17orf99Q6UX52 265 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 RETREG2Q8NC44 543 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 FAM167AQ96KS9 214 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 NTPCRQ9BSD7 190 aaKnown RBP22.27■■□□□ 1.16
CPNE9-202ENST00000383831 METTL14Q9HCE5 456 aaKnown RBP22.27■■□□□ 1.16
CPNE9-202ENST00000383831 TISP43B9A030 160 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 TLR2O60603 784 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 FECHP22830 423 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 MARK3P27448 753 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 CYP2J2P51589 502 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 MORN1Q5T089 497 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 PLPPR4Q7Z2D5 763 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 SMC1BQ8NDV3 1235 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 CCDC102AQ96A19 550 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 TMEM143Q96AN5 459 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 BORCS6Q96GS4 357 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 TINF2Q9BSI4 451 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 TBX20Q9UMR3 447 aa22.27■■□□□ 1.16
CPNE9-202ENST00000383831 LUC7L2Q9Y383 392 aaKnown RBP22.27■■□□□ 1.16
CPNE9-202ENST00000383831 ADGRA3Q8IWK6 1321 aa22.26■■□□□ 1.15
CPNE9-202ENST00000383831 PSMC2P35998 433 aaKnown RBP22.26■■□□□ 1.15
CPNE9-202ENST00000383831 RFC5P40937 340 aa22.26■■□□□ 1.15
CPNE9-202ENST00000383831 ADCYAP1R1P41586 468 aa22.26■■□□□ 1.15
CPNE9-202ENST00000383831 KCNMA1Q12791 1236 aa22.26■■□□□ 1.15
CPNE9-202ENST00000383831 FIGNQ5HY92 759 aa22.26■■□□□ 1.15
CPNE9-202ENST00000383831 SLC9A9Q8IVB4 645 aa22.26■■□□□ 1.15
CPNE9-202ENST00000383831 FAM186BQ8IYM0 893 aa22.26■■□□□ 1.15
CPNE9-202ENST00000383831 BBXQ8WY36 941 aaPredicted RBP22.26■■□□□ 1.15
CPNE9-202ENST00000383831 HVCN1Q96D96 273 aa22.26■■□□□ 1.15
CPNE9-202ENST00000383831 NAA15Q9BXJ9 866 aaKnown RBP22.26■■□□□ 1.15
CPNE9-202ENST00000383831 TRMT1Q9NXH9 659 aaKnown RBP22.26■■□□□ 1.15
CPNE9-202ENST00000383831 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.25■■□□□ 1.15
CPNE9-202ENST00000383831 DENND3A2RUS2 1198 aa22.25■■□□□ 1.15
CPNE9-202ENST00000383831 GH1P01241 217 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms