RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 CXCL10P02778 98 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 RPLP2P05387 115 aaKnown RBP18.01■□□□□ 0.47
SNRPB-201ENST00000381342 UBA7P41226 1012 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 RABGGTBP53611 331 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
SNRPB-201ENST00000381342 GRIN2CQ14957 1233 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 TMEM119Q4V9L6 283 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 FAM26DQ5JW98 314 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 HYIQ5T013 277 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 PPP2R2DQ66LE6 453 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 USP49Q70CQ1 688 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 SYMPKQ92797 1274 aaKnown RBP18.01■□□□□ 0.47
SNRPB-201ENST00000381342 CDK5RAP3Q96JB5 506 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 MAP7D2Q96T17 732 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 DBR1Q9UK59 544 aaKnown RBP18.01■□□□□ 0.47
SNRPB-201ENST00000381342 CFAP45Q9UL16 551 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 PPME1Q9Y570 386 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 ATP6V1DQ9Y5K8 247 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 TRPV2Q9Y5S1 764 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 MICAL3Q7RTP6 2002 aa18.01■□□□□ 0.47
SNRPB-201ENST00000381342 ARHGEF35A5YM69 484 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 M0QZ92 97 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 PPP6R2O75170 966 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 TMOD1P28289 359 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 KRT85P78386 507 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 KARSQ15046 597 aaKnown RBP18■□□□□ 0.47
SNRPB-201ENST00000381342 KIZQ2M2Z5 673 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 RASSF8Q8NHQ8 419 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 KCNG4Q8TDN1 519 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 SEPT8Q92599 483 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 EPSTI1Q96J88 318 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 ZNF668Q96K58 619 aaPredicted RBP18■□□□□ 0.47
SNRPB-201ENST00000381342 BHMT2Q9H2M3 363 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 XPNPEP1Q9NQW7 623 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 GINS2Q9Y248 185 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 PTPRSQ13332 1948 aa18■□□□□ 0.47
SNRPB-201ENST00000381342 LAMA3Q16787 3333 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 SZT2Q5T011 3432 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 GHRP10912 638 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 XRCC6P12956 609 aaKnown RBP eCLIP17.99■□□□□ 0.47
SNRPB-201ENST00000381342 PLCG1P19174 1290 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 IER5Q5VY09 327 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 HERC6Q8IVU3 1022 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 NME8Q8N427 588 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 MAFAQ8NHW3 353 aaPredicted RBP17.99■□□□□ 0.47
SNRPB-201ENST00000381342 LRRC15Q8TF66 581 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 TMEM143Q96AN5 459 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 CALML4Q96GE6 196 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 MTRQ99707 1265 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 JPH2Q9BR39 696 aaPredicted RBP17.99■□□□□ 0.47
SNRPB-201ENST00000381342 CELF4Q9BZC1 486 aaKnown RBP17.99■□□□□ 0.47
SNRPB-201ENST00000381342 NT5C3AQ9H0P0 336 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 CDHR5Q9HBB8 845 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 ATP6V0A4Q9HBG4 840 aa17.99■□□□□ 0.47
SNRPB-201ENST00000381342 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
SNRPB-201ENST00000381342 YBX2Q9Y2T7 364 aaKnown RBP17.99■□□□□ 0.47
SNRPB-201ENST00000381342 TLL1O43897 1013 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 CUTAO60888 179 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 DGAT1O75907 488 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 EYA4O95677 639 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 ME1P48163 572 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 DNM2P50570 870 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 WDR5P61964 334 aaKnown RBP17.98■□□□□ 0.47
SNRPB-201ENST00000381342 LPIN1Q14693 890 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 TCTN1Q2MV58 587 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 FBXO47Q5MNV8 452 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 LEO1Q8WVC0 666 aaPredicted RBP17.98■□□□□ 0.47
SNRPB-201ENST00000381342 SPATA32Q96LK8 384 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 OSMRQ99650 979 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 CCSER1Q9C0I3 900 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 SUCLA2Q9P2R7 463 aaPredicted RBP17.98■□□□□ 0.47
SNRPB-201ENST00000381342 DNM3Q9UQ16 869 aa17.98■□□□□ 0.47
SNRPB-201ENST00000381342 MYH11P35749 1972 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 SLC26A4O43511 780 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 GAS2O43903 313 aaKnown RBP17.97■□□□□ 0.47
SNRPB-201ENST00000381342 GPR32O75388 356 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 AMHP03971 560 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 IGFBP4P22692 258 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 TXLNAP40222 546 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 GPC3P51654 580 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 NLRP11P59045 1033 aaKnown RBP17.97■□□□□ 0.47
SNRPB-201ENST00000381342 AXDND1Q5T1B0 1012 aaPredicted RBP17.97■□□□□ 0.47
SNRPB-201ENST00000381342 PADI6Q6TGC4 694 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 MAEAQ7L5Y9 396 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 RHPN2Q8IUC4 686 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 KSR1Q8IVT5 923 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 EXOC8Q8IYI6 725 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 DBF4BQ8NFT6 615 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 TMEM40Q8WWA1 233 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 PSPC1Q8WXF1 523 aaKnown RBP17.97■□□□□ 0.47
SNRPB-201ENST00000381342 APBB2Q92870 758 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 SCLT1Q96NL6 688 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 PRDM12Q9H4Q4 367 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 GPRC5CQ9NQ84 441 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 RCOR1Q9UKL0 485 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 PCDHA7Q9UN72 937 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 GBF1Q92538 1859 aa17.97■□□□□ 0.47
SNRPB-201ENST00000381342 A0A087X0B3 334 aa17.96■□□□□ 0.47
SNRPB-201ENST00000381342 SSBP05455 408 aaKnown RBP eCLIP17.96■□□□□ 0.472e-7■□□□□ 10.7
SNRPB-201ENST00000381342 MYOGP15173 224 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms