RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 ZNRF3Q9ULT6 936 aa13.79□□□□□ -0.2
PUDP-201ENST00000381077 ZNF536O15090 1300 aa13.79□□□□□ -0.2
PUDP-201ENST00000381077 AGPSO00116 658 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 NMT1P30419 496 aaKnown RBP13.78□□□□□ -0.2
PUDP-201ENST00000381077 CXCR5P32302 372 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 HADHBP55084 474 aaKnown RBP13.78□□□□□ -0.2
PUDP-201ENST00000381077 HNRNPH2P55795 449 aaKnown RBP13.78□□□□□ -0.2
PUDP-201ENST00000381077 BFSP1Q12934 665 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 CUL1Q13616 776 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 XRRA1Q6P2D8 792 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 SND1Q7KZF4 910 aaKnown RBP eCLIP13.78□□□□□ -0.2
PUDP-201ENST00000381077 RASGEF1CQ8N431 466 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 RDM1Q8NG50 284 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 HVCN1Q96D96 273 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 UIMC1Q96RL1 719 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 UBIAD1Q9Y5Z9 338 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 CLIC2O15247 247 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 SHOX2O60902 331 aaPredicted RBP13.78□□□□□ -0.2
PUDP-201ENST00000381077 HSF2BPO75031 334 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 ARP10275 920 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 GGCXP38435 758 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 MAPK7Q13164 816 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 CD302Q8IX05 232 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 RUFY1Q96T51 708 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 PACSIN1Q9BY11 444 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 KIAA1683Q9H0B3 1180 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
PUDP-201ENST00000381077 CCPG1Q9ULG6 757 aa13.78□□□□□ -0.2
PUDP-201ENST00000381077 SMCHD1A6NHR9 2005 aa13.77□□□□□ -0.2
PUDP-201ENST00000381077 EP400Q96L91 3159 aa13.77□□□□□ -0.2
PUDP-201ENST00000381077 PGRMC1O00264 195 aaKnown RBP13.77□□□□□ -0.21
PUDP-201ENST00000381077 DDX3XO00571 662 aaKnown RBP eCLIP13.77□□□□□ -0.21
PUDP-201ENST00000381077 CHMP2AO43633 222 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 EVI5O60447 810 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 FTCDO95954 541 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 KRT13P13646 458 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 KCNA1Q09470 495 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 TNFAIP1Q13829 316 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 MIER3Q7Z3K6 550 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 HDAC7Q8WUI4 952 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 RFFLQ8WZ73 363 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 ACCSQ96QU6 501 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.21
PUDP-201ENST00000381077 STXBP5LQ9Y2K9 1186 aa13.77□□□□□ -0.21
PUDP-201ENST00000381077 PFASO15067 1338 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 BHMG1C9JSJ3 638 aaPredicted RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 HIP1RO75146 1068 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 ZMYND10O75800 440 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 HEXIM1O94992 359 aaKnown RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 SFNP31947 248 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 MYL7Q01449 175 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 KIF22Q14807 665 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 PADI6Q6TGC4 694 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 C4orf19Q8IY42 314 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 NIM1KQ8IY84 436 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 NAP1L3Q99457 506 aaPredicted RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 SLITRK6Q9H5Y7 841 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 GOLGA6CA6NDK9 693 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 GOLGA6DP0CG33 693 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 ZBTB48P10074 688 aaPredicted RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 PLS3P13797 630 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 ITGB5P18084 799 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 RXRBP28702 533 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 ABCD1P33897 745 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 NOP2P46087 812 aaKnown RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 QARSP47897 775 aaKnown RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 JAK3P52333 1124 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 EZH2Q15910 746 aaKnown RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 PEX26Q7Z412 305 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 HES6Q96HZ4 224 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 PSMB7Q99436 277 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 INTS2Q9H0H0 1204 aaKnown RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 TSPYL1Q9H0U9 437 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 ISCUQ9H1K1 167 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 AGO4Q9HCK5 861 aaKnown RBP13.76□□□□□ -0.21
PUDP-201ENST00000381077 KCNH7Q9NS40 1196 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 GOLGA6AQ9NYA3 693 aa13.76□□□□□ -0.21
PUDP-201ENST00000381077 KCNK3O14649 394 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 DHX15O43143 795 aaKnown RBP13.75□□□□□ -0.21
PUDP-201ENST00000381077 EXOC3O60645 756 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 MATR3P43243 847 aaKnown RBP eCLIP13.75□□□□□ -0.21
PUDP-201ENST00000381077 GTF2BQ00403 316 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 DRAP1Q14919 205 aaPredicted RBP13.75□□□□□ -0.21
PUDP-201ENST00000381077 ZC2HC1CQ53FD0 456 aaPredicted RBP13.75□□□□□ -0.21
PUDP-201ENST00000381077 EMC10Q5UCC4 262 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 RHOT2Q8IXI1 618 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 SYCP3Q8IZU3 236 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 DAW1Q8N136 415 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 MS4A14Q96JA4 679 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 VEZTQ9HBM0 779 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 SLC38A10Q9HBR0 1119 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 ANKEF1Q9NU02 776 aa13.75□□□□□ -0.21
PUDP-201ENST00000381077 WRAP73Q9P2S5 460 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms