RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 PCDHA13Q9Y5I0 950 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 K7ENM7 598 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 IRF6O14896 467 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 CYP27A1Q02318 531 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 KIF5AQ12840 1032 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 PRKG1Q13976 671 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 GBP6Q6ZN66 633 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 TXLNBQ8N3L3 684 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 IFIH1Q9BYX4 1025 aaKnown RBP21.07■□□□□ 0.96
GMDS-201ENST00000380805 IKZF4Q9H2S9 585 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 SIX2Q9NPC8 291 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 DAAM1Q9Y4D1 1078 aa21.07■□□□□ 0.96
GMDS-201ENST00000380805 ANO9A1A5B4 782 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 USO1O60763 962 aaKnown RBP21.06■□□□□ 0.96
GMDS-201ENST00000380805 ITGBL1O95965 494 aaPredicted RBP21.06■□□□□ 0.96
GMDS-201ENST00000380805 UCHL3P15374 230 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 WHAMMP3Q1A5X7 153 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 DCAF17Q5H9S7 520 aaPredicted RBP21.06■□□□□ 0.96
GMDS-201ENST00000380805 ANO5Q75V66 913 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.06■□□□□ 0.96
GMDS-201ENST00000380805 SRGAP1Q7Z6B7 1085 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 KSR1Q8IVT5 923 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 CEP112Q8N8E3 955 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 ATP6V0A1Q93050 837 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 HVCN1Q96D96 273 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 ACCSQ96QU6 501 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 DEF6Q9H4E7 631 aa21.06■□□□□ 0.96
GMDS-201ENST00000380805 JPH1Q9HDC5 661 aaPredicted RBP21.06■□□□□ 0.96
GMDS-201ENST00000380805 MYH9P35579 1960 aaKnown RBP21.05■□□□□ 0.96
GMDS-201ENST00000380805 CXCL11O14625 94 aa21.05■□□□□ 0.96
GMDS-201ENST00000380805 MAPK13O15264 365 aa21.05■□□□□ 0.96
GMDS-201ENST00000380805 AKR1B10O60218 316 aa21.05■□□□□ 0.96
GMDS-201ENST00000380805 SLC9A1P19634 815 aa21.05■□□□□ 0.96
GMDS-201ENST00000380805 TUBB4BP68371 445 aa21.05■□□□□ 0.96
GMDS-201ENST00000380805 PAPD7Q5XG87 772 aaKnown RBP21.05■□□□□ 0.96
GMDS-201ENST00000380805 CCDC43Q96MW1 224 aaKnown RBP21.05■□□□□ 0.96
GMDS-201ENST00000380805 C17orf75Q9HAS0 396 aa21.05■□□□□ 0.96
GMDS-201ENST00000380805 FRMD4BQ9Y2L6 1034 aa21.05■□□□□ 0.96
GMDS-201ENST00000380805 SPDYE5A6NIY4 337 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 TOMM70O94826 608 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 PSAPP07602 524 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 ANXA13P27216 316 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 APBA1Q02410 837 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 XKR9Q5GH70 373 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 ABHD15Q6UXT9 468 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 OTUD6AQ7L8S5 288 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 TRAPPC11Q7Z392 1133 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 ERO1BQ86YB8 467 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 BTBD7Q9P203 1132 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 SLC9A2Q9UBY0 812 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 TFR2Q9UP52 801 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 KCNH4Q9UQ05 1017 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 ATP8B3O60423 1300 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 IGSF9BQ9UPX0 1349 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 ZNF862O60290 1169 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 EIF3JO75822 258 aaKnown RBP21.04■□□□□ 0.96
GMDS-201ENST00000380805 EDNRBP24530 442 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 PRKCIP41743 596 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 JAM2P57087 298 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 PLS1Q14651 629 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 FBXO38Q6PIJ6 1188 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 HAUS6Q7Z4H7 955 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 ANKRD13AQ8IZ07 590 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 CNKSR2Q8WXI2 1034 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 RABGGTAQ92696 567 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 SECISBP2LQ93073 1101 aaKnown RBP21.04■□□□□ 0.96
GMDS-201ENST00000380805 CDCA5Q96FF9 252 aa21.04■□□□□ 0.96
GMDS-201ENST00000380805 BZW2Q9Y6E2 419 aaKnown RBP21.04■□□□□ 0.96
GMDS-201ENST00000380805 TMEM150BA6NC51 233 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 FMO5P49326 533 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 RTP1P59025 263 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 STXBP2Q15833 593 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 ASIC2Q16515 512 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 UTP14CQ5TAP6 766 aaKnown RBP21.03■□□□□ 0.96
GMDS-201ENST00000380805 TCERG1LQ5VWI1 586 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 SYCP3Q8IZU3 236 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 SPIRE2Q8WWL2 714 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 GOLGA1Q92805 767 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 KCNN1Q92952 543 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 NTPCRQ9BSD7 190 aaKnown RBP21.03■□□□□ 0.96
GMDS-201ENST00000380805 PDLIM7Q9NR12 457 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 GCNT4Q9P109 453 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 GABBR1Q9UBS5 961 aa21.03■□□□□ 0.96
GMDS-201ENST00000380805 ATG7O95352 703 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 ACTN1P12814 892 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 MAGEA1P43355 309 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 NPEPPSP55786 919 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 ACTR2P61160 394 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 BFSP1Q12934 665 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 RAPGEF1Q13905 1077 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 SLC18A3Q16572 532 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 TDRD12Q587J7 1177 aaKnown RBP21.02■□□□□ 0.96
GMDS-201ENST00000380805 PLA2G4FQ68DD2 849 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 IRF2BP2Q7Z5L9 587 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 GPR161Q8N6U8 529 aaKnown RBP21.02■□□□□ 0.96
GMDS-201ENST00000380805 TRIM58Q8NG06 486 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 KIFAP3Q92845 792 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 FHOD1Q9Y613 1164 aa21.02■□□□□ 0.96
GMDS-201ENST00000380805 CYP2J2P51589 502 aa21.01■□□□□ 0.95
GMDS-201ENST00000380805 ALDH5A1P51649 535 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms