RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 LRRC14Q15048 493 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 ZNF564Q8TBZ8 553 aaPredicted RBP18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 KIF2CQ99661 725 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 PSMA2P25787 234 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 EPHB1P54762 984 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 IGBP1P78318 339 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 SEPT9Q9UHD8 586 aaPredicted RBP18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 CCNL1Q9UK58 526 aaPredicted RBP18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 IVNS1ABPQ9Y6Y0 642 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 CEP170Q5SW79 1584 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 DEAF1O75398 565 aaPredicted RBP18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 PFKFB3Q16875 520 aaPredicted RBP18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 BTBD6Q96KE9 485 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 PDP2Q9P2J9 529 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 CALB1P05937 261 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 MIS18BP1Q6P0N0 1132 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 SGSM3Q96HU1 749 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 DDX56Q9NY93 547 aaKnown RBP18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.23■□□□□ 0.515e-7■■■□□ 16.6
COL4A3BP-203ENST00000380494 PRDM4Q9UKN5 801 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 CCT8L1PA6NM43 557 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 DNAJC6O75061 913 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 MORF4L2Q15014 288 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 EFTUD2Q15029 972 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 ERICH1Q86X53 443 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 MMGT1Q8N4V1 131 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 VPS39Q96JC1 886 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 STX18Q9P2W9 335 aaKnown RBP18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 RNF103-CHMP3A0A140T963 221 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 APOA1P02647 267 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 ALDH1B1P30837 517 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 KCNH2Q12809 1159 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 PTGISQ16647 500 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 ENO4A6NNW6 628 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 E9PMD0 336 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 ASAP2O43150 1006 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 NR3C1P04150 777 aa18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 PSMC1P62191 440 aaKnown RBP18.22■□□□□ 0.51
COL4A3BP-203ENST00000380494 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■■■■■ 54.9
COL4A3BP-203ENST00000380494 ZNF189O75820 626 aaPredicted RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 SHC4Q6S5L8 630 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 NUP85Q9BW27 656 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 ROPN1BQ9BZX4 212 aaPredicted RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 ROPN1Q9HAT0 212 aaPredicted RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 MEIS1O00470 390 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 SYF2O95926 243 aaKnown RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 KRT14P02533 472 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 GTF2IP78347 998 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 AP3B2Q13367 1082 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 PROSER3Q2NL68 480 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 SCG3Q8WXD2 468 aaKnown RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 BRIP1Q9BX63 1249 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 SPDYE16A6NNV3 312 aaPredicted RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 KITP10721 976 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 ABCB5Q2M3G0 1257 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 MB21D2Q8IYB1 491 aaPredicted RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 GUF1Q8N442 669 aaKnown RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 STRIP2Q9ULQ0 834 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 NOD1Q9Y239 953 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 WDR64B1ANS9 1081 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 SLFN12LQ6IEE8 588 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 OR6B2Q6IFH4 312 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 KDM7AQ6ZMT4 941 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 MLXIPLQ9NP71 852 aa18.21■□□□□ 0.51
COL4A3BP-203ENST00000380494 hCG_2014768A0A024R1R8 64 aa18.21■□□□□ 0.5
COL4A3BP-203ENST00000380494 TOM1O60784 492 aa18.21■□□□□ 0.5
COL4A3BP-203ENST00000380494 YWHAHQ04917 246 aaPredicted RBP18.21■□□□□ 0.5
COL4A3BP-203ENST00000380494 COASYQ13057 564 aa18.21■□□□□ 0.5
COL4A3BP-203ENST00000380494 PPP1R18Q6NYC8 613 aa18.21■□□□□ 0.5
COL4A3BP-203ENST00000380494 SLC7A3Q8WY07 619 aa18.21■□□□□ 0.5
COL4A3BP-203ENST00000380494 H3BRJ5 948 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 ACADSP16219 412 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 TRIM59Q8IWR1 403 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 TMCO5AQ8N6Q1 288 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 L2HGDHQ9H9P8 463 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 ADAM22Q9P0K1 906 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 SYNJ2BP-COX16A0A087WUM0 186 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 LLGL1Q15334 1064 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 DLGAP5Q15398 846 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 CNGA3Q16281 694 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 KIAA1755Q5JYT7 1200 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 ZWILCHQ9H900 591 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 BTG4Q9NY30 223 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 IL1RAPL1Q9NZN1 696 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 COX16Q9P0S2 106 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 IP6K2Q9UHH9 426 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 ZNF804BA4D1E1 1349 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 NR1I3Q14994 352 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 ALKBH8Q96BT7 664 aaKnown RBP18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 RPS6KC1Q96S38 1066 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 ATP10AO60312 1499 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 SAMD9LQ8IVG5 1584 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 LDHAP00338 332 aaKnown RBP18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 MARK3P27448 753 aa18.2■□□□□ 0.5
COL4A3BP-203ENST00000380494 MTF1Q14872 753 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms