RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 PNKPQ96T60 521 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 FUT8Q9BYC5 575 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 GOLGB1Q14789 3259 aaKnown RBP13.78□□□□□ -0.2
VPS16-202ENST00000380445 TARSL2A2RTX5 802 aaKnown RBP13.78□□□□□ -0.2
VPS16-202ENST00000380445 WDR64B1ANS9 1081 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 K7ENM7 598 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 PTPRAP18433 802 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 YWHABP31946 246 aaKnown RBP13.78□□□□□ -0.2
VPS16-202ENST00000380445 PSMC5P62195 406 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 SNRPFP62306 86 aaKnown RBP13.78□□□□□ -0.2
VPS16-202ENST00000380445 APBA1Q02410 837 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 DGKZQ13574 1117 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 NAB2Q15742 525 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 TMEM174Q8WUU8 243 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 DRC1Q96MC2 740 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 MAF1Q9H063 256 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 RNF146Q9NTX7 359 aa13.78□□□□□ -0.2
VPS16-202ENST00000380445 ASTN2O75129 1339 aaPredicted RBP13.78□□□□□ -0.2
VPS16-202ENST00000380445 MYH10P35580 1976 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 A0A087X0T9 212 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 BTNL10A8MVZ5 291 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 FAM228BP0C875 321 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 PLS3P13797 630 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 CCND2P30279 289 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 GPS2Q13227 327 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 KIAA0753Q2KHM9 967 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 HDXQ7Z353 690 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 ATG4CQ96DT6 458 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 ACCSQ96QU6 501 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 EFCC1Q9HA90 598 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 RNF14Q9UBS8 474 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 PPP2R3BQ9Y5P8 575 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 MYH11P35749 1972 aa13.77□□□□□ -0.2
VPS16-202ENST00000380445 EXOC3O60645 756 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 SASH3O75995 380 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 KRT13P13646 458 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 FERP16591 822 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 PAFAH1B1P43034 410 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 FMO5P49326 533 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 HNRNPH2P55795 449 aaKnown RBP13.77□□□□□ -0.21
VPS16-202ENST00000380445 IFI16Q16666 785 aaKnown RBP13.77□□□□□ -0.21
VPS16-202ENST00000380445 MAP9Q49MG5 647 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 BEND6Q5SZJ8 279 aaPredicted RBP13.77□□□□□ -0.21
VPS16-202ENST00000380445 ZNF572Q7Z3I7 529 aaPredicted RBP13.77□□□□□ -0.21
VPS16-202ENST00000380445 NLRX1Q86UT6 975 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 GPIHBP1Q8IV16 184 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 DAW1Q8N136 415 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 MSL3Q8N5Y2 521 aaKnown RBP13.77□□□□□ -0.21
VPS16-202ENST00000380445 GPRASP2Q96D09 838 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 OSBPL9Q96SU4 736 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 ANKEF1Q9NU02 776 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 ATP8B3O60423 1300 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.21
VPS16-202ENST00000380445 DKC1O60832 514 aaKnown RBP eCLIP13.77□□□□□ -0.21
VPS16-202ENST00000380445 CCDC172P0C7W6 258 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 STAT1P42224 750 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 CYP2J2P51589 502 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 PTK2Q05397 1052 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 BAATQ14032 418 aaPredicted RBP13.77□□□□□ -0.21
VPS16-202ENST00000380445 COG2Q14746 738 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 CCDC181Q5TID7 509 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 ANKRD13CQ8N6S4 541 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 ST6GALNAC4Q9H4F1 302 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 SIX2Q9NPC8 291 aa13.77□□□□□ -0.21
VPS16-202ENST00000380445 GFPT2O94808 682 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 DSG3P32926 999 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 JAM2P57087 298 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 VSNL1P62760 191 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 CETN1Q12798 172 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 ENOX2Q16206 610 aaKnown RBP13.76□□□□□ -0.21
VPS16-202ENST00000380445 ANGEL2Q5VTE6 544 aaKnown RBP13.76□□□□□ -0.21
VPS16-202ENST00000380445 INTS8Q75QN2 995 aaKnown RBP13.76□□□□□ -0.21
VPS16-202ENST00000380445 KSR1Q8IVT5 923 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 ZKSCAN4Q969J2 545 aaPredicted RBP13.76□□□□□ -0.21
VPS16-202ENST00000380445 YY1AP1Q9H869 796 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 MAP2K7O14733 419 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 ZNF185O15231 689 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 BUB1O43683 1085 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 RFX1P22670 979 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 BFSP1Q12934 665 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 SNRNP48Q6IEG0 339 aaKnown RBP13.76□□□□□ -0.21
VPS16-202ENST00000380445 ZNF746Q6NUN9 644 aaPredicted RBP13.76□□□□□ -0.21
VPS16-202ENST00000380445 VSIG10LQ86VR7 867 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 C12orf56Q8IXR9 622 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 NSUN6Q8TEA1 469 aaKnown RBP13.76□□□□□ -0.21
VPS16-202ENST00000380445 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 SALL4Q9UJQ4 1053 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 ADAMTS5Q9UNA0 930 aa13.76□□□□□ -0.21
VPS16-202ENST00000380445 N4BP1O75113 896 aaKnown RBP13.75□□□□□ -0.21
VPS16-202ENST00000380445 EIF3JO75822 258 aaKnown RBP13.75□□□□□ -0.21
VPS16-202ENST00000380445 SMC1AQ14683 1233 aaKnown RBP13.75□□□□□ -0.21
VPS16-202ENST00000380445 MAEAQ7L5Y9 396 aa13.75□□□□□ -0.21
VPS16-202ENST00000380445 ZNF571Q7Z3V5 609 aaPredicted RBP13.75□□□□□ -0.21
VPS16-202ENST00000380445 RUBCNQ92622 972 aa13.75□□□□□ -0.21
VPS16-202ENST00000380445 CDHR1Q96JP9 859 aa13.75□□□□□ -0.21
VPS16-202ENST00000380445 SENP7Q9BQF6 1050 aa13.75□□□□□ -0.21
VPS16-202ENST00000380445 STK33Q9BYT3 514 aa13.75□□□□□ -0.21
VPS16-202ENST00000380445 UBXN6Q9BZV1 441 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms