RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 NECTIN1Q15223 517 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 TPRNQ4KMQ1 711 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 CES5AQ6NT32 575 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 EFCAB12Q6NXP0 572 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 NIPA1Q7RTP0 329 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 ECHDC2Q86YB7 292 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 RASGRP4Q8TDF6 673 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 HELQQ8TDG4 1101 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 HCFC2Q9Y5Z7 792 aa20.15■□□□□ 0.82
PDLIM4-202ENST00000379018 CFAP54Q96N23 3096 aa20.14■□□□□ 0.82
PDLIM4-202ENST00000379018 IGLV3-22A0A075B6J6 115 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 hCG_1984214I3L0E3 225 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 BRD1O95696 1058 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 ASGR2P07307 311 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 CLK2P49760 499 aaKnown RBP20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 FUT2Q10981 343 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 MTMR3Q13615 1198 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 CLLU1OSQ5K130 101 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 RARS2Q5T160 578 aaKnown RBP20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 ZNF713Q8N859 430 aaPredicted RBP20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 TMEM87AQ8NBN3 555 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 GLT8D2Q9H1C3 349 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 CEP131Q9UPN4 1083 aa20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 MAFBQ9Y5Q3 323 aaPredicted RBP20.14■□□□□ 0.81
PDLIM4-202ENST00000379018 KLF18A0A0U1RQI7 1052 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 ADAMTS3O15072 1205 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 PRR16Q569H4 304 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 ZNF746Q6NUN9 644 aaPredicted RBP20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 KANK3Q6NY19 840 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 C12orf76Q8N812 135 aaPredicted RBP20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 AUTS2Q8WXX7 1259 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 IRF2BPLQ9H1B7 796 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 SORCS3Q9UPU3 1222 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 PCDHA10Q9Y5I2 948 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 PLXNA3P51805 1871 aa20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 PTPRZ1P23471 2315 aaPredicted RBP20.13■□□□□ 0.81
PDLIM4-202ENST00000379018 WDR81Q562E7 1941 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 C2orf71A6NGG8 1288 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 CHMP2AO43633 222 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 CLASP2O75122 1294 aaKnown RBP20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 CSDE1O75534 798 aaKnown RBP20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 TMOD1P28289 359 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 CDC27P30260 824 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 SETQ01105 290 aaPredicted RBP20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 LONRF3Q496Y0 759 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 RNF20Q5VTR2 975 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 SLC39A11Q8N1S5 342 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 NLRP7Q8WX94 980 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 ADAMTS10Q9H324 1103 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 TBC1D22BQ9NU19 505 aa20.12■□□□□ 0.81
PDLIM4-202ENST00000379018 MAGEB2O15479 319 aa20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 GALR2O43603 387 aaPredicted RBP20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 ZC3H11AO75152 810 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 EIF4BP23588 611 aaKnown RBP20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 FAM43BQ6ZT52 329 aaPredicted RBP20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 SMAP1Q8IYB5 467 aaPredicted RBP20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 MRPL43Q8N983 215 aaKnown RBP20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 TDRD5Q8NAT2 981 aaKnown RBP20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 TMEM169Q96HH4 297 aa20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 FAM167AQ96KS9 214 aa20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 NECTIN4Q96NY8 510 aa20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 ADAM7Q9H2U9 754 aa20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 MFSD1Q9H3U5 465 aa20.11■□□□□ 0.81
PDLIM4-202ENST00000379018 SPDYE4A6NLX3 237 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 CXCL14O95715 111 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 CYP3A4P08684 503 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 ALDH7A1P49419 539 aaKnown RBP20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 BCAR1P56945 870 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 FGD1P98174 961 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 PRKCEQ02156 737 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 ITIH3Q06033 890 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 UBALD2Q8IYN6 164 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 VPS52Q8N1B4 723 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 REXO1Q8N1G1 1221 aaKnown RBP20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 TMEM105Q8N8V8 129 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 FAM217BQ9NTX9 383 aaPredicted RBP20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 LIMD1Q9UGP4 676 aa20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 DBR1Q9UK59 544 aaKnown RBP20.1■□□□□ 0.81
PDLIM4-202ENST00000379018 OATP04181 439 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 MTHFRP42898 656 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 GPC3P51654 580 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 BMS1Q14692 1282 aaKnown RBP20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 PFKFB3Q16875 520 aaPredicted RBP20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 DHX32Q7L7V1 743 aaKnown RBP20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 ASCL5Q7RTU5 278 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 TEX2Q8IWB9 1127 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 LPPQ93052 612 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 C6orf50Q9HD87 102 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 INPP5FQ9Y2H2 1132 aa20.09■□□□□ 0.81
PDLIM4-202ENST00000379018 WDR64B1ANS9 1081 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 ZNF862O60290 1169 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 DARSP14868 501 aaKnown RBP20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 EPCAMP16422 314 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 ADD1P35611 737 aaKnown RBP20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 EXOSC10Q01780 885 aaKnown RBP20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 TBC1D8BQ0IIM8 1120 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 UGCGQ16739 394 aa20.08■□□□□ 0.81
PDLIM4-202ENST00000379018 TMEM173Q86WV6 379 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms