RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 OSBPL9Q96SU4 736 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 DIS3Q9Y2L1 958 aaKnown RBP12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 ORC6Q9Y5N6 252 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 CCDC195A0A1B0GUA6 201 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 C9orf131Q5VYM1 1079 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 SYT2Q8N9I0 419 aaPredicted RBP12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 CCDC138Q96M89 665 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 DOLKQ9UPQ8 538 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 GOLGA8MH3BSY2 632 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 BBOX1O75936 387 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 PPP2R2AP63151 447 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 CDC37Q16543 378 aaPredicted RBP12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 ATG16L1Q676U5 607 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 FAF2Q96CS3 445 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 TMEM60Q9H2L4 133 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 CPSF3Q9UKF6 684 aaKnown RBP12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 SH3GLB2Q9NR46 395 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 DNAJC12Q9UKB3 198 aa12.83□□□□□ -0.36
PCDHA9-201ENST00000378122 ZBTB22O15209 634 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 CDO1Q16878 200 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 MUM1L1Q5H9M0 696 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ARL6IP4Q66PJ3 421 aaKnown RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 EPM2AIP1Q7L775 607 aaPredicted RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 APOBEC3FQ8IUX4 373 aaKnown RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 OSBPL5Q9H0X9 879 aaPredicted RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 TLK1Q9UKI8 766 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 MXI1P50539 228 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 RASGRF1Q13972 1273 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ACCSLQ4AC99 568 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 FAM47EQ6ZV65 393 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ATP6V0A1Q93050 837 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 WDR11Q9BZH6 1224 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 YY1AP1Q9H869 796 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 RPAP1Q9BWH6 1393 aaPredicted RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 USP6P35125 1406 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 GYG2O15488 501 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 PRPSAP2O60256 369 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ATP1A1P05023 1023 aaKnown RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 TRPC7Q9HCX4 862 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ESYT3A0FGR9 886 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 TEX33O43247 280 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 KCNQ2O43526 872 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 PTPREP23469 700 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 STAT2P52630 851 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 HABP4Q5JVS0 413 aaKnown RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 RGS9BPQ6ZS82 235 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ATP6V1E2Q96A05 226 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 SERPINI1Q99574 410 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 HEMGNQ9BXL5 484 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 CREB3O43889 395 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 LIFRP42702 1097 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 SREBF2Q12772 1141 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 TWF2Q6IBS0 349 aaKnown RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 TRIML2Q8N7C3 387 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 PDLIM2Q96JY6 352 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 HEXIM2Q96MH2 286 aaKnown RBP12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 ZCWPW1Q9H0M4 648 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 SMYD3Q9H7B4 428 aa12.82□□□□□ -0.36
PCDHA9-201ENST00000378122 PNMA6FA0A0J9YX94 578 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 TTI1O43156 1089 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 SPARCL1Q14515 664 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 UNC13DQ70J99 1090 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 PCGF5Q86SE9 256 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 SCN4BQ8IWT1 228 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 EFHD1Q9BUP0 239 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 LEMD3Q9Y2U8 911 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 CACNB2Q08289 660 aaPredicted RBP12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 NLRP10Q86W26 655 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 RAD54LQ92698 747 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 FAM81BQ96LP2 452 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 CDK8P49336 464 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 ZNF211Q13398 564 aaPredicted RBP12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 PPP4R3CPQ6ZMV5 832 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 TRMT10CQ7L0Y3 403 aaKnown RBP12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 CPSF1Q10570 1443 aaKnown RBP12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 FOXN1O15353 648 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 CYP2D6P10635 497 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 PSMA2P25787 234 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 ARL4AP40617 200 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 DDX53Q86TM3 631 aaKnown RBP12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 LCA5Q86VQ0 697 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 PIGOQ8TEQ8 1089 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 FAM149B1Q96BN6 582 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 WDR17Q8IZU2 1322 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 FAM196BA6NMK8 535 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 RASA4BC9J798 803 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 PODXLO00592 558 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 RASA4O43374 803 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 CTSHP09668 335 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 GNAT1P11488 350 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 CRLF3Q8IUI8 442 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 PASD1Q8IV76 773 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 EFCAB6Q5THR3 1501 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 LOC102724159A0A0B4J2E5 919 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 POTEMA6NI47 508 aa12.81□□□□□ -0.36
PCDHA9-201ENST00000378122 BMP3P12645 472 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms